Punctularia strigosozonata: PUNSTDRAFT_141784
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Entry
PUNSTDRAFT_141784 CDS
T03131
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
psq
Punctularia strigosozonata
Pathway
psq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PUNSTDRAFT_141784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psq03400
]
PUNSTDRAFT_141784
DNA repair and recombination proteins [BR:
psq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
PUNSTDRAFT_141784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
SWI2_SNF2
GM_CSF
Motif
Other DBs
NCBI-GeneID:
18880794
NCBI-ProteinID:
XP_007380936
JGI:
141784
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MAGTCFGASPFGGPSTPVAPSISTPASSALRRPYKALKPSVTPNVSTSGAKPVGTGLSSV
PITTGKIRRVELESVNLSSTGSQQENKPPTTRGRDSYWSASWRKPQQKKHKTWDGDAFIA
CRNDVFTILSDTGKKLGTAKWKGDPLFSGYRIFAANKEFELDAEIPASKMPAMNGSDGWA
DEGMLDEEGWETVVTQNPRALSARTSISDNPIVDTVSASTSKKFIPPTSFYGKSAPKPKK
GPLHDPEAEGALVMKNPNKEHIKKNNAKDLPIVPVVLDPILAVRLRPHQKEGVKFLYECV
MGLRKHEGQGCILADEMGLGKTLQTIALVWTLLKQNPYAGVGPVIGKAMIVCPVSLINNW
KNEFHKWLGRDRVGVFVGDKDKAHIKQFINTRIHQVLVIGYEKLRTVIDDLRYCNPPIGL
IICDEGHRLKSANNKTSQMFKALNTKRRVILSGTPIQNDLSEFHAMADFCNPGLLDDYKT
FKRVYEDPILKSRAVGCTAKEAEIGEARTTQLLNVAKSFVLRRDASILDNYLPPKCEYVV
FVTPTRLQLSIFSQILRADKLDDLVEGSVAESLALINMLTRVSTSPVLLKATADQAKSKS
IQANSIKRNALYQAVALLPERFKIEDVSLSGKLTALASLLRMIRKHTEEKCIVVSHYTST
LHIIEQFCKVKGYTYLRLDGQTPPTKRQEYVNEFNKTSQSAKFLFLLSAKAGGVGLNLIG
ASRLCLIDSDWNPSHDLQAMARIHRDGQKRPVFIYRFLTAGTIDEKIYQRQVTKLGLSDS
LMGTDTGGSSKSDSFTAKDLRDIFRVHLNTACHTHELLDCPCDREGSSTDREDDNAEYTD
EEAESTAEEMSFTLASQIKPGQLNRMEKAYMAKKRAALAALGEWTHINCLKPDAQANVHD
DLLRKLVRAAQPEKTVTDSVPAVSAKKSLLDVLDIDNMDAERNEGCADLKNLPGGTVSFL
FERVSKDAPPPPADEGETGN
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggccggaacgtgctttggcgcaagccctttcggtggcccttcaactcctgtggcaccg
tctatcagcacccctgcgagcagtgctctccgtagaccatacaaagcgctcaagccatcc
gtcaccccaaatgtctctacttctggagccaagccagttggtaccggcctatcatcagtg
cctattactaccggcaagattcgccgggtcgagctcgagtccgtcaacctctcatctacc
ggctcacagcaagagaacaaaccgccaactacccgaggtagagattcgtattggtccgca
agctggagaaagcctcaacagaagaagcacaaaacatgggacggggatgcattcatcgcg
tgccggaatgacgtgttcacaatcttgtcagacaccgggaagaagctcgggactgctaag
tggaagggcgacccactattcagcggctatcgcatctttgccgctaacaaggaattcgaa
ctcgacgcggagataccggcctctaagatgcctgcaatgaacggaagcgacgggtgggcg
gatgaaggcatgctggatgaggaaggttgggagacggttgtcacccagaatcctagagct
ctctctgccagaaccagcatctccgataaccccatagttgacacagtttccgcgtcgacg
agtaagaagttcatacctcctacttcgttctatgggaaatccgccccgaaaccgaagaag
ggacctttacacgatccggaagcagaaggcgccttggttatgaagaatcccaataaagag
cacatcaagaagaataatgcgaaagacttgcccatagtacccgtagtcttggatccgatc
ctagccgttagactcaggccgcatcagaaagaaggcgtcaagtttctgtatgaatgtgtt
atgggactgcgcaagcacgaaggccagggatgcatattggctgacgagatgggtcttgga
aaaactctgcagaccattgcattggtctggactctccttaagcagaatccgtacgcggga
gtaggccctgtcatcggcaaggcgatgatcgtttgtcccgtatccctcatcaacaattgg
aagaacgagtttcacaagtggctgggtagagaccgcgtaggtgtatttgtcggcgataag
gacaaggcacacatcaagcaattcattaatacccggatccaccaagttctcgtcatcggc
tacgagaaactaaggactgtgattgacgacttgagatattgcaaccctcccattgggctg
atcatttgcgatgaaggacatcgattgaagtcggcgaacaacaagacctctcagatgttc
aaagcgctcaacacgaagcgacgtgttatcctctcgggcacacccatccagaatgatctc
agtgaatttcatgctatggctgatttctgtaaccctggtctcctcgatgactacaagacg
ttcaaacgagtgtacgaggatcccattctaaagagtcgagcagtggggtgtacggcgaag
gaagccgagataggagaagcgcggacgactcaattgctcaacgtagcgaagagtttcgtg
ctgcgccgagatgcgagtattctcgacaactatcttccgcccaagtgcgagtatgtggta
tttgtgacaccgacgcgactccagctctccatattctcccaaattctccgagccgacaaa
ttggacgacctcgttgagggctccgtggccgagtcgctggcgctcatcaacatgctgacc
agggtcagtaccagtcccgtgctgctgaaggcgaccgcggaccaagcaaaaagcaagtcg
atccaagccaattccatcaagagaaatgccctctaccaagctgttgctttgttacccgaa
cgtttcaagatcgaggatgtctccctgagcggcaagcttactgcgttggcgtccctgctg
agaatgattcgtaaacacactgaagagaaatgtatcgtggtatcgcattacacctcaacc
ttgcacatcatcgaacagttttgcaaggtcaaaggttacacttaccttcggctagacggg
caaacgccccccacgaagcgacaagaatacgtaaacgagttcaacaagacgagccagtca
gcgaaattcctgttcttgctgagcgccaaagctggcggtgtgggtctgaatctcatcggc
gcctcccgtctctgcctcatcgattcggattggaatccaagtcacgatcttcaagccatg
gctcgcatccatagagatgggcagaaacgacctgtattcatttacaggttcttgaccgcg
ggaacgatcgacgagaaaatctatcagcgccaagtgacgaaactcgggcttagtgattcg
ctcatgggaacggacactggcggttcttcgaagtcggactcattcaccgccaaggacctc
cgcgacatcttccgcgtacatctgaacacagcttgccacactcacgagctcctcgactgc
ccgtgtgatcgcgagggatcgtcgaccgatcgtgaagatgacaacgcggagtacaccgat
gaagaagcggaaagcacagcggaagagatgagcttcacgcttgcgtctcaaatcaagccg
ggacaattaaacaggatggagaaggcctacatggccaagaagagagcagcgctggcggcc
ctgggcgaatggacgcacatcaactgtctgaagcccgacgcgcaggccaacgttcacgac
gacctccttcggaagctcgttcgcgcggcgcagcccgaaaagaccgtgacggattccgta
ccagccgtatcagccaagaagtcgctgctcgacgtcctcgacatcgacaacatggatgcg
gagcgaaacgagggttgcgcagacctcaagaacctacctggcggtaccgtctctttcctg
ttcgaacgggtgtccaaagatgctcctcctccgcccgcagatgaaggggagacaggcaat
tag
DBGET
integrated database retrieval system