Punctularia strigosozonata: PUNSTDRAFT_143388
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Entry
PUNSTDRAFT_143388 CDS
T03131
Name
(RefSeq) DEAD-domain-containing protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
psq
Punctularia strigosozonata
Pathway
psq03013
Nucleocytoplasmic transport
psq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PUNSTDRAFT_143388
03015 mRNA surveillance pathway
PUNSTDRAFT_143388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_143388
Enzymes [BR:
psq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PUNSTDRAFT_143388
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PUNSTDRAFT_143388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
18881061
NCBI-ProteinID:
XP_007383318
JGI:
143388
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MEKDADGFYTGPAPAAKPKATEEPAPEPPKDAPTAEGSKPGQATDLIKSTFDVTVTLADQ
QADVNSPLYSAKTFEELGLHADLLKGLYDMGFSKPSKIQERALPLLLKDPPQNMIGQSQS
GTGKTAAFVLTMLSRVDFNLNKTQALCLAPTRELARQIMSVIVAMGKFTPVQTEYAIKDS
LPKGASRITAHIVVGTPGTMIDLMRKRILDTSDVKVFVLDEADNMLDQDGLGDQTLRVKN
SLPRGKPVQIILFSATFPDHVRNFASKFAPNANKIELKQNELSVDAIRQFYMDCKNEEHK
YDILVSLYSLLTIGQSIIFCERKHTADRVAQRMSSEGHKVASLHGAKDTSERDSIIDRFR
EGLEKVLITTNVMARGIDVLQVNMVVNYDLPLLNERDKSISKSDMRPDLETYIHRIGRTG
RFGRKGISVNFVHDQTTWKQMEQIEKALGRQIIRIETNDLDEMEETMKKYLK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggacgctgatggcttctacactggccctgcacccgccgcgaaaccgaaagca
accgaggagcctgcgcctgagcctccgaaagacgcgccaacggccgaaggatcaaaaccc
gggcaggccacagatctgatcaaatcgaccttcgatgttaccgttactctggccgatcaa
caggctgatgtcaactcacccttgtacagcgcgaagactttcgaggagctaggcttacac
gcggatcttctcaagggtctgtacgacatgggtttctcgaagccgtcgaagattcaagag
cgcgcgttgccgttgttgctcaaggatcccccgcagaatatgatcgggcagtcgcaatcc
ggcacagggaagacggccgccttcgtcctcacgatgcttagtcgagtcgacttcaacctg
aacaagacccaggcactttgcctcgcgcctacgcgtgagttagctcgtcaaatcatgtcg
gtcatcgtcgccatgggcaagttcaccccggtgcagaccgaatacgcaatcaaggatagt
ctgccgaagggcgcgtcacgaatcactgcccatattgttgtcggaactcctgggacaatg
attgacttgatgcggaagagaattctcgacaccagcgacgtcaaggtgttcgtgttggat
gaggccgataacatgttggatcaagatggtcttggcgatcagactcttcgtgtcaagaac
tcgcttccgcgggggaagcctgtacagatcatcttgttctccgccaccttccccgaccac
gtccggaactttgcgagcaaatttgctccgaatgccaacaagatcgagctgaagcagaat
gaactgtccgtggacgctatccgacagttctacatggattgcaaaaacgaagaacacaaa
tacgatattcttgtcagcctttactccttgctcacgatcggtcaaagcatcatcttctgc
gagaggaaacatacagccgatagggtagcccagcgtatgtctagcgaagggcacaaagtc
gcttctcttcacggcgccaaagacacgtcggagcgagactcgatcatcgacaggttccgc
gagggtctggagaaggtgctcatcacaaccaacgtcatggctcgaggaatcgacgtcttg
caagtcaatatggtggtcaactacgatctacctcttctgaacgaacgcgacaagtcaata
tcgaagtcggacatgcgaccagacttggagacgtatattcacaggatcggccgtaccggt
cggtttggacgcaagggaatctcggtaaacttcgtacacgaccaaacgacgtggaagcag
atggagcagatcgagaaggcgcttggacggcagattatccgtattgagacgaatgatttg
gacgagatggaagagaccatgaagaaatatctgaagtga
DBGET
integrated database retrieval system
