KEGG   Punctularia strigosozonata: PUNSTDRAFT_143616
Entry
PUNSTDRAFT_143616 CDS       T03131                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14299  nucleoporin SEH1
Organism
psq  Punctularia strigosozonata
Pathway
psq03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PUNSTDRAFT_143616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psq03019]
    PUNSTDRAFT_143616
   04131 Membrane trafficking [BR:psq04131]
    PUNSTDRAFT_143616
Messenger RNA biogenesis [BR:psq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PUNSTDRAFT_143616
Membrane trafficking [BR:psq04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    PUNSTDRAFT_143616
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_Aladin Ge1_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_EIPR1 EIF3I
Other DBs
NCBI-GeneID: 18881106
NCBI-ProteinID: XP_007383648
JGI: 143616
LinkDB
Position
Unknown
AA seq 490 aa
MIQTGLLQDAHNDLITDASYDFYGLRLATAGLDQRVKIWSLDELTGKWTIAHEWKAHDAP
VSKLSWAHPEFGSILASASFDRTVKVWEETVVPGDADQPSQSQQSQATEPASQGSQNDYN
DGAAEPYVVLNTRWIERAILHDAKGTVRGVEFAPSYFGLKLATISSDNNLRIYEAVEEPA
GPSQPTNVPTRTWSLSEELDVTLLPSSPSAKTISLTHTLSPTPTQTQTSMAGANATAQAT
LLQQELHAQQEKEQEREKKRGGNREADGGWTLSWCKDRHWGELIAAAVGTSGIVKIIHLS
PSRRPQTLLILDPSSPSTSGQQRTTAAPNNPLGFINGHSRATDSTATSDETTKLSVTSVS
WAPSCGRSYHLIATGSLGGHVRIWKVKPPADSEGEGANGGVSREDDGWTGEMVAEFDDHQ
SPVTRVEWNITGTILSSAGNDGRIRLWKATFSDVWRAAGHINVEQAPEHDDDEDTGEGDG
DKGDDVDMEG
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgatccaaacagggctattacaagacgcgcacaacgacctcattaccgacgcgtcgtat
gatttctatggtttgagacttgcaacggcgggtctagatcagagggtgaaaatctggtct
ctagacgagcttacgggaaaatggacgattgcgcacgagtggaaggcacacgacgcgccg
gtatccaaactatcatgggcgcaccctgaattcggttcgatactcgcaagcgcctctttt
gataggacggtcaaagtttgggaggagactgtcgtacctggggacgcggaccaaccatct
caatcccaacaaagtcaagccaccgaacccgcgtcgcaaggctcgcaaaacgattacaac
gacggcgcagcggagccgtatgtcgttctaaatacacgatggatcgagcgcgctatatta
catgacgcgaaaggcaccgtacgcggcgttgagtttgcgccttcgtacttcgggctcaag
ctggctaccatctcaagcgacaacaacctgcgcatctacgaagcagtagaagagcctgca
ggcccctctcagccgaccaatgttcctacccgaacctggtccctgtccgaagaactggat
gtcactctcctgccatcctccccatcggccaaaacaatctccctcactcacaccctctcc
ccaacacccacgcaaacgcaaacgtccatggcaggcgcgaatgcgactgcgcaggcaaca
ttattgcaacaggagttacacgcacaacaggagaaggaacaagaacgagagaagaagcgg
ggcggaaaccgcgaagccgacgggggttggacccttagctggtgtaaagaccggcactgg
ggcgaattgatagctgctgctgtcggaaccagcggcattgttaaaataattcatttgtca
ccttcccggagaccgcaaacactgctcatacttgacccgtcgtctccttccacctctggc
cagcagcggacgacagcggcgccgaacaatcccttagggttcatcaatgggcattctcga
gcgacggactcgacagccacgtcggatgagacaacaaagctctccgttacttcggtttcc
tgggcgccatcctgcggccggtcctatcatctcatcgcgaccggttccctgggcggacac
gtacggatatggaaggtgaaaccaccggccgacagcgaaggcgagggggccaacgggggc
gtgagcagagaggatgatgggtggacgggggaaatggtcgctgaattcgacgatcatcag
agtcccgtgacgagagtagaatggaacatcaccgggacaatcctatcctcagcgggcaac
gatggtcgtatccggctatggaaagccaccttcagtgatgtctggagagcagccggacac
atcaatgtcgaacaggcaccagaacatgatgacgacgaggatactggggagggagatgga
gataagggtgacgatgtcgatatggagggatga

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