Punctularia strigosozonata: PUNSTDRAFT_143768
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Entry
PUNSTDRAFT_143768 CDS
T03131
Name
(RefSeq) DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
psq
Punctularia strigosozonata
Pathway
psq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PUNSTDRAFT_143768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psq03400
]
PUNSTDRAFT_143768
DNA repair and recombination proteins [BR:
psq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PUNSTDRAFT_143768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
18881139
NCBI-ProteinID:
XP_007383959
JGI:
143768
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MALMYGKEKDSETLDLDTVTDPGFCSFFAKLPAKSPETHGTLRLFARHASDKDYFSAHGP
DAHYVAQHVFHTNSVIKWLGKGSSGPNKTGLASVTMNEMMAKGFLREALTAKQLRVEIWV
PEKGQGKKATKFVLDKEASPGNLQAVEDMLFVNTDLMTAPMVMAIKIASSSGPPGSTYVK
ATTKNIGVAFADTTLREIGVADFADNDLFSNTESLIIQLGIKECLVPTGTVSGKTDRDVD
LNKLKAVLERCGVVCTERKPSEFNSRSVEDDLTRLLKPEASSSTTASTSEQLSLPVAPAS
LNALITYLSLLSDPANHGTWTIRTHDLSQFMKLDASALRALNLVDGPNGETSANKNTTLL
GLLNKCKTAQGTRMLASWLKQPLVNLHEIRKRQDLVEIFVEDANSRRTLQDEYLKLMPDL
HRISKRFQKNAASLEDVVRVYQAVLKLPGIIESLANVESTSMHAKELIDEIYLVKLREYD
GSLNKYGEMVETTIDLNELDNHNYVIKPDYDPKLQELAEKLMKTRDGLDDEHREVGRDLG
LELDKQIFLENSPTYGYCFRLTKGVSKAVHNKKNYYELATTKSGAFFTTSNLRDLANEYK
DLTDLYARTQAGLVKEIVSIASTYTPVLELFNVVLAHLDVILSMAHVAVNAPEAYVKPKV
LQKGSSSLILKAARHPCLEVQDDISFIPNDVEMIKGEGEFQIITGPNMGGKSTYIRQVGV
IALMAQVGSFVPCEEAQLPIFDSILCRVGAGDSQLKGISTFMAEMLETAAILRSASSNSL
IIIDELGRGTSTYDGFGLAWAISEHIASKIHAFCMFATHFHELTSLDQQLPHVRNLHVVA
HVSKRGSELNDRDITLLYKVEPGVCDQSFGIHVAELANFPQSVVKLARRKANELEDFGRD
EAEDAEFSEEVTEEGVELVEELLRTWATRSAGGSDEDVDMDAADLTPEQQLEELKRCVET
FKPRIEANPWVRSLLTEL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggccctcatgtacgggaaagagaaggacagtgagacgctggatttagataccgtcaca
gatcctgggttttgttcgttcttcgccaagttacccgccaagtcgcccgagacgcacggc
actcttcgtctcttcgcgcgacatgcctcggataaagactacttctccgctcatggtccc
gacgctcactacgtcgctcagcacgtcttccacacgaacagcgtgattaaatggctcggc
aagggctcgagcgggccgaacaagaccggcctcgcgagcgtgacgatgaacgagatgatg
gccaaaggtttcttgcgagaggccctaacggcaaagcagcttcgtgtagagatctgggta
ccggagaagggacaaggcaagaaggcgacgaagttcgtgcttgacaaagaggcgtctccg
ggaaacctgcaagccgtggaggatatgctgttcgttaatacggacctcatgactgcaccc
atggtcatggcaataaagatcgcctcgtcatcaggtccgcctggctcgacatacgtcaaa
gccaccacgaagaatatcggggtcgcatttgcggacacgacactgcgcgagattggcgta
gcggatttcgccgataacgaccttttctctaatacagagtctctgatcatacagcttggc
atcaaagaatgtctcgttcccactggcacagtctcgggcaagaccgaccgggacgtcgac
ctcaataagttgaaagccgtcctagaacgatgcggtgtcgtgtgtacggagcgaaaacca
agtgaattcaactccagaagcgtcgaagatgaccttacgcgactgctcaaacccgaagcg
tcatcgtctactactgcgtcgactagcgaacaactctcgctaccagtcgcaccggcttcg
ttgaacgctttgatcacgtatctttcgctactttctgatccggcgaatcacgggacatgg
acgattcgtacacacgacctctcgcaattcatgaaacttgacgcaagcgcccttcgtgcc
cttaatcttgtcgatggaccaaacggcgagacctccgcaaacaagaacactacactcctc
ggcctgctcaacaagtgcaaaacagcgcaaggtactcgaatgctggctagctggctcaag
caaccactggttaatttgcacgagatccggaagaggcaagatctcgtcgagattttcgtg
gaggacgcaaattctcggaggacgttacaggacgaatatctgaagctgatgcccgatcta
caccgcatctccaagcgcttccagaagaatgctgcatcgctcgaagacgtggtccgcgtg
taccaggctgtactgaagcttccgggcatcatcgaatcgctagcgaacgtcgagtcaacc
tcaatgcacgcgaaagaactcatcgacgaaatttacctcgttaaacttcgtgaatacgac
ggcagcttgaacaagtatggcgagatggtggagacgaccatcgacctgaacgagctcgac
aaccacaactacgtcattaagccggactacgacccgaagttgcaggagctggcagaaaag
ctgatgaagacaagggatggcttggacgacgagcatcgcgaagtggggcgggacctcggt
cttgaactcgacaaacaaatctttcttgaaaactctccgacgtacgggtattgttttcgt
ttgaccaaaggagtgtcgaaggcggttcacaacaaaaagaattattatgaacttgccacg
accaagagcggcgcattcttcacaacgtctaaccttcgagaccttgccaacgagtacaag
gatctaacggatttgtacgcccggacgcaggcgggcttggtgaaagagatcgtgagcata
gcttcgacgtatactccggttttggagctgttcaatgtcgtcctggcgcacttggatgtg
atattaagcatggcacacgttgcagtcaatgcacctgaagcgtacgtcaagccgaaggtt
cttcaaaaaggatccagtagtttgatactcaaagccgcgaggcatccctgcctcgaggtc
caagacgatatcagcttcataccgaacgatgttgagatgatcaagggtgaaggcgaattc
cagatcattacggggccgaacatgggtggcaaaagcacatatatccgacaggttggcgtt
atagccctcatggctcaagttggctctttcgtgccctgcgaggaagcccaacttcctatc
tttgattcgattctttgccgcgtcggcgctggtgatagccagctgaagggcatctcgact
ttcatggcggaaatgctggagactgcggctatccttcgatcggcatcatcgaattcgctc
atcattattgatgagctaggtcgaggaacgtctacgtatgatggcttcggtttggcttgg
gccatctctgagcatattgcctcgaagattcacgccttctgcatgttcgcgacgcacttt
cacgaattgacctcgctggaccagcagctacctcatgtcaggaacttacatgtcgtagcc
cacgtctccaaaagaggctcagaattgaacgaccgcgatatcaccctgctgtacaaagtc
gagcccggcgtctgcgaccaaagctttggcattcacgtcgcggaattggcaaacttccca
caaagcgtcgtcaagctggcgagacgaaaggctaatgaactcgaagacttcgggcgcgac
gaggccgaggacgccgagttctctgaagaggtgacagaggagggtgtcgaactcgttgag
gagctgctgcggacgtgggcaacgaggtccgcaggcggaagcgatgaagacgttgacatg
gacgccgccgatctaactccagaacaacagttggaggaactgaagcgttgcgttgaaacc
ttcaaacctcgcatcgaagccaacccctgggtacgctcactgctcaccgaattataa
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integrated database retrieval system