Punctularia strigosozonata: PUNSTDRAFT_43226
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Entry
PUNSTDRAFT_43226 CDS
T03131
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12897
transformer-2 protein
Organism
psq
Punctularia strigosozonata
Pathway
psq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PUNSTDRAFT_43226
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psq01009
]
PUNSTDRAFT_43226
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psq03041
]
PUNSTDRAFT_43226
Protein phosphatases and associated proteins [BR:
psq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
PUNSTDRAFT_43226
Spliceosome [BR:
psq03041
]
Common components
Common spliceosomal components
SR proteins
PUNSTDRAFT_43226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
18882530
NCBI-ProteinID:
XP_007381759
JGI:
43226
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MYGGDSTAPPLDPYTDEYNAPPADPPASDRDRDAPRRSRSRSPGRRSPGYRSPYSRRSPP
PKRPTHAPHAPPPSSVLGVFGLSIRTQERDLDDEFSRFGQVEKVTIVYDQRSGRSRGFGF
IKMATVEDATKAIENLNGVDLNGRRIRVDYSVTERPHAPTPGEYMGHRRRRDGYGGRDSY
RDRDYRDNDRERYGRDRDHDRDDRDRRDRDPYGRDDRDWRDRRGSPPPRRGYSPEYRRRR
SYSRSPPRGGASSPRGRDYEAPANGDSRCRKSSPVPGRIARASVNSCKVKDRSMNTNNVE
YRPPDIVVCDEKAANMSGIATFPLWVAKI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcggcgactctacagctcctcctttggatccttacacggacgaatacaacgcg
ccgcccgcggatcctcccgcgtcggacagggaccgcgacgcgccccgccgctccagatcg
cgcagcccagggcgtcgcagccctggctaccgaagcccttacagtcgccgctcacctcct
ccgaagagacctacccatgcgccccacgcgcctcctccgagcagcgtcctcggtgtcttt
ggcctcagcatccgcacccaggagcgcgatcttgacgacgagttcagtcgctttggccag
gtggaaaaggttaccatcgtctacgatcaacgatctggccgctcgcgcggtttcggtttc
atcaagatggccaccgtcgaagatgctaccaaagctattgaaaacctcaacggcgtcgac
ctcaatggccgtcgtatccgcgtggactactcggtgaccgagcgtcctcacgctcctacc
cccggcgaatacatgggccatcgccgccgtcgtgatggatacggcggtcgcgattcgtac
cgcgaccgtgattatcgtgacaacgaccgcgagcggtatggtcgtgacagggaccatgac
cgcgacgaccgtgaccgtcgcgaccgggacccgtacgggcgtgacgaccgtgactggcgg
gaccgccgtggttcccctccgcctcgtcgcgggtactcgccggagtataggaggcgccgg
agctactccaggagcccccctcgaggtggggcatccagccctcgtggccgtgactacgag
gcacccgcgaacggcgattctaggtgcagaaagtcgtctcctgtaccgggtcgcatcgcc
cgtgctagtgtcaattcttgcaaggtcaaggacagaagcatgaatacgaacaacgtagaa
taccgaccccctgatatcgtcgtctgtgacgagaaagcggcaaatatgtcagggatcgcc
acgttcccgttgtgggttgcgaagatctga
DBGET
integrated database retrieval system
