KEGG   Punctularia strigosozonata: PUNSTDRAFT_49022
Entry
PUNSTDRAFT_49022  CDS       T03131                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
psq  Punctularia strigosozonata
Pathway
psq03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PUNSTDRAFT_49022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psq03021]
    PUNSTDRAFT_49022
   03019 Messenger RNA biogenesis [BR:psq03019]
    PUNSTDRAFT_49022
Transcription machinery [BR:psq03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     PUNSTDRAFT_49022
Messenger RNA biogenesis [BR:psq03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     PUNSTDRAFT_49022
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 Torus zf-CCHC zf-CCCH_4 zf-CCHC_2 zf-CCHC_3 F-box_5
Other DBs
NCBI-GeneID: 18883076
NCBI-ProteinID: XP_007379113
JGI: 49022
LinkDB
Position
Unknown
AA seq 286 aa
MSVTLAAGPSVLRDIVRPQFHQNNFREEVLIKNELGIKLDKDDQICRLALTPAGCPLGPL
HCPLRHTTPSPANFQPPKQLPTHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRMP
ECWWYAKYGYCSAGDECLYAHPKERKIECPDYRRGFCKLGPTCPRKHIRRVACQLYLSGF
CPMGPDCPRGHPKPQLPPPSAYEPPPPPANRDLGPPPPGYGRYADFDRGGPSLTGNPMVG
PPRRNLDDVMCFKCGEKGHYANTCRNRNVPGNRGGLDRSRRYGGEE
NT seq 861 nt   +upstreamnt  +downstreamnt
atgagcgtgactctcgctgctgggccgtcggtattgagggatatcgtccgtccacagttt
caccagaacaatttccgagaggaagtgttgatcaagaatgagctcgggataaagctggac
aaagacgaccagatatgtcggctggctcttacgccagctggctgcccgctgggacctttg
cactgtcccttacgccatactactccttctcctgccaattttcaaccaccgaaacagctg
ccgacacatcctcgagatcgcgagcgtcttgctaccgtatgcaaacactggttgcgcggg
ctttgtaagaaaggtgacgcttgtgaatttttgcacgagtacaacctccggcgaatgccc
gagtgttggtggtatgccaaatatggttactgctcggctggcgacgaatgtctatacgca
cacccgaaggagcgcaaaatcgagtgcccggactacagaagaggattctgtaagctaggc
ccgacatgcccccgcaagcacatccggagagttgcttgtcaattatacctctcgggcttc
tgcccgatgggacctgactgtccgcgtggccacccgaaaccgcagctaccgccaccatca
gcatatgaacctccaccacctcctgccaaccgggatctcggtcctccacctccaggatac
ggtcgatatgcggattttgaccgtggtgggccatcgttgaccggaaacccgatggttggc
ccccctcgccggaacctggacgatgtcatgtgcttcaagtgtggagagaaggggcattac
gcgaatacatgtcggaaccgcaatgtcccaggcaaccgaggcgggctcgacaggtcgagg
agatatggcggagaggaatga

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