Punctularia strigosozonata: PUNSTDRAFT_53889
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Entry
PUNSTDRAFT_53889 CDS
T03131
Name
(RefSeq) IkappaB kinase complex IKAP component
KO
K11373
elongator complex protein 1
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psq03016
]
PUNSTDRAFT_53889
Transfer RNA biogenesis [BR:
psq03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
PUNSTDRAFT_53889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
TPR_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
Beta-prop_EML_2
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
18883728
NCBI-ProteinID:
XP_007385912
JGI:
53889
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MRNLTLERISESRIRDTNITSLAFDVDNDTLYAASERVNADGDVELELYRIPGDVNSVNP
PEIVSMFTTPRFSNEAPGLSSQLVSLKVVSEHRTLAMITRGGEIATMSLEDNLSEVEVLG
SFDEGIQAVGWSPDETVLVLISGDKLVLMTATYEVLSENPLNPAGFGADAPINVGWGSKQ
TQFHGSLGKAAARAPVAQEEAGLSPDDDLLPRISWRGDGAFFVVSSITDGGRPRRMLRVY
DRECILQSTAEPVAGLEHALSWRPSGSLIATTQRFGFDGGGRGREGRHDVVFFERNGLRH
GEFGLREAYRRLDGAAWKPWGYRVRELAWNTDSTVLAVWIEGDDSGSDIVQLWTTSNYHW
YLKQEISPTSACDTDCTSNKPARFTSMVWHPESALKLVLSGPSGVVQRVYAWETAASSSS
PPIDTGSVAVADGKSMLLTPFRSQNVPPPMCAYRLELPPNCRAPAHSAFALSHDVFGTLW
EDGSVSIWDLHTRIGPGRQKVMEPSLLHTGSIDLDANWRQLVLQLPGPDVAKIVALGTTM
TEPQSDVIVVFDSATPSNQAIIRMIHINGRLVQTSPRIVWQHPEGELYAVEGEPGSLRSL
TRFPEFCFTVGHVNSTSGPVFIGLAHSGKLYAAGEGDKSISLASNVNSFRVTPSFVIFTT
SAHEAQFAPIKDVTNRLNAQDHEADASWERRRVERGSRIVTVVPSTMSLVLQMPRGNLET
ISPRPLVIEVVRQDIDAGNYRKAFLTCRKHRVDLSILFKHDQAGFMKRLASFVDQIDDVD
HFNLFLTTVGRTVEPSEQASAVCDAVRGELERKDRLRFINSILTAYVVKAPSDHEAALRL
LLSIRESHSDLVEEAVKYVIFLVDADKLFDTALGMYDFSLVLMIAQHSQKDPREYLPFLR
ELRAMDKYYQRFRIDDHLRRHASALRNLSLAGPDRFDEAMEYAENHILHQESLVIWKGTD
QYPIVLEKYGDHLFDRREFKEAALAFVEAKKLHKAMVAHERALSWRELFDIVIREHVSPE
DIKDMAYRVSDDLLTKKQYVDAARVLLDYAGDTRQAVIALVNGNHISEARRVITLKREPD
LLEEIVHPGVLECSAQVMEDINEMRDQLRKQLNRIRELRIKKVEEPDAFYGTEDAGLHNV
DVMTDISMPGTAFTRYTRAPTTASRASKLSSRSKRKMERKIGSGRKGTVDEEEYLLASVS
KLVARFTAVQGDARSLLPHLFELTEEHRAHGSELQSEVSQFEEDLKSAVEEIWQRGSPSD
GEPVPDGWSARMARSEKEHRVNPADKVPKPTFSVEDWRLQLPQIVAAA
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatctgaccctcgagaggatatccgaatcacgtatccgagacacgaacattacg
tcgctcgcgttcgacgtcgacaatgacacgctctatgcggcgtccgaacgggttaatgcc
gacggcgacgtggagttagagctttacaggatccctggcgacgttaattccgtcaacccg
ccggagattgtgagcatgttcacgacgccgcgattttcgaacgaagctccgggcttgtcg
tcccagttggtgtccctgaaggtcgtttccgaacatagaaccctggccatgatcacgcgc
ggcggtgagattgccacaatgtccttggaggacaatttatctgaggtggaagtactggga
tctttcgatgagggaatccaagccgtaggctggagcccggatgaaaccgtgctagtgcta
atctcaggcgataaacttgtgctcatgacagccacttatgaagtgctgtccgagaacccg
cttaatcccgcgggatttggcgctgacgcacccatcaatgtcggctggggttctaaacaa
acacaatttcacggttcactcggcaaagcggcagcgcgggccccagtcgctcaagaagag
gccggtcttagcccggatgatgatctcctaccacggatcagctggcgcggcgatggcgct
ttctttgttgtgtcttccattacggatggcggacgaccgcgtcggatgctccgcgtatat
gatcgcgagtgcatattgcagtccacggcagaacccgtcgcagggctagaacacgctctt
tcgtggaggccctcggggagccttatcgcgacaactcagagatttggtttcgatggtggc
ggtcggggcagggaggggcgtcacgatgtcgttttcttcgaaaggaatggcctgcgtcac
ggagagtttggacttagggaagcctataggagactggacggcgcggcttggaagccgtgg
ggatatcgggttcgtgagcttgcgtggaacacggattcgacagttcttgcggtatggatc
gagggtgacgactccggatcagacattgtgcaactatggacgacttccaactaccattgg
tatctcaagcaagagatatcaccaacatccgcctgcgacacggattgcacgagcaacaaa
cctgcccggttcacgtccatggtttggcatccggaatctgccctcaagctcgttctcagt
ggcccatcaggagtggttcagcgagtatatgcctgggaaaccgccgcctcttctagcagc
cctcctatagacaccggctccgtagctgttgccgacggaaaatcgatgctattgactcct
ttccgttcgcaaaacgtgccacctcctatgtgcgcgtatcgcctcgaacttcccccaaat
tgtcgagctccagcacattccgcctttgctcttagccacgacgtgttcggcactctttgg
gaagacgggtctgtcagcatctgggatcttcacacaaggatcggtcctgggcgacaaaaa
gtcatggagccgtccctactgcataccgggtcaatcgaccttgatgccaattggaggcag
ctggtcttgcagctccctggtcccgatgttgccaagatcgttgcgttaggcacaactatg
acggaaccgcagtcggatgtgatcgttgtgttcgattcagccacgccgtcaaatcaagcc
attattagaatgatccatatcaatggtcgattggtccagacttcgccgcgtatcgtgtgg
cagcatccggaaggggaactgtatgccgtcgaaggggaacccggatctctgcgttctcta
acaaggttccccgagttttgcttcacggtgggccacgtgaactctacctcgggaccggta
ttcatcggtttggcacattctggcaaattgtacgccgccggtgaaggcgacaaatccatc
agcctcgccagcaacgttaattcgtttcgcgtcaccccctcatttgtgatctttaccacg
tctgcccatgaggcacagttcgcgcccataaaggacgttacgaaccgattgaatgcgcaa
gatcacgaagccgatgcctcgtgggaacgacggcgcgttgaacgaggctcaagaattgtc
accgtagtcccgagtacaatgagtcttgtccttcagatgcctcgaggtaatctggaaaca
atatctccgcgaccgctcgtcattgaggtcgtcaggcaagacatcgatgctggaaattac
cgaaaagccttcttgacttgcagaaagcatagggtggacctcagcatcttgttcaaacac
gatcaagctggcttcatgaaacgtcttgcctcctttgtggaccagattgatgacgtcgat
catttcaatcttttcctaaccacagtaggacgcactgttgagccctcggagcaagcgagc
gcagtctgcgatgcagtccgcggggaactggagaggaaagacagactgaggttcatcaac
tcaatcctgacggcgtacgtcgtgaaagctccctcggaccacgaggctgcattacgcctc
cttttgtctatacgagaaagccactctgatctcgtagaggaggctgtcaaatatgtgatt
ttccttgtggatgctgataaattgtttgatactgccctcgggatgtatgacttttcactc
gttctgatgattgcgcaacattcgcagaaggacccacgagaatacttacccttcctgcga
gaattgcgagcgatggacaagtattatcaacgattccgcatcgacgaccacctccgacga
cacgccagtgctctgcgaaacctcagtttggcgggacccgatcgcttcgatgaggcgatg
gaatatgctgaaaaccacatattacaccaagaatccttggtcatatggaaaggaacagat
caataccccatcgtcctcgaaaagtacggtgaccacctgttcgatcgccgggagttcaaa
gaagctgcgcttgccttcgtggaagccaagaaactgcacaaggcgatggtcgcccacgag
agggccctgtcttggcgagaactcttcgacatagtgatccgtgaacatgtctctccagaa
gatatcaaggacatggcttaccgtgtctctgatgatctattgaccaagaaacagtacgtt
gacgccgcgcgagtcctgcttgactatgccggggacactcggcaagcagtcatcgcgcta
gtgaacgggaaccatatatcagaagcgagacgagttatcacactgaagcgggaacctgac
ctcctagaggagatagtacatccgggggtccttgaatgcagtgcacaagtgatggaagat
atcaatgagatgagagatcagcttcgcaagcagctcaatcgcattcgcgaactgcgtatc
aaaaaggtggaagagccagatgccttttatggcacggaggatgccggtctccacaacgtt
gatgtgatgaccgatatttctatgcccggcacggcgtttactcggtatacaagagcccca
acaacagcgtctcgcgcttccaagttgagctcccgttcgaagaggaagatggaacgcaaa
attggatccggtcgtaagggcacggtcgatgaggaagaatacctgcttgcatccgtctcc
aagctcgtcgcccgattcacggctgtgcaaggagacgctcgcagtcttctcccgcatctg
tttgaactcacagaggagcatcgagcacacggttcggaattacaaagcgaggtatcacaa
ttcgaagaagacctgaagtccgcggtagaggagatatggcagcgcggatcgcctagcgac
ggtgaaccggtgccggatggttggtcagcgcggatggcacgaagtgagaaggagcataga
gttaacccggcggacaaagtgcccaagccgacgttcagcgtggaggattggcggctgcag
ctcccacaaatcgtggcagcggcttga
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