Punctularia strigosozonata: PUNSTDRAFT_54329
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Entry
PUNSTDRAFT_54329 CDS
T03131
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
psq
Punctularia strigosozonata
Pathway
psq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PUNSTDRAFT_54329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psq03041
]
PUNSTDRAFT_54329
Spliceosome [BR:
psq03041
]
Complex A
U1 snRNP components
U1 related factors
PUNSTDRAFT_54329
Complex B
PUNSTDRAFT_54329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
WDR62-MABP1_CC
Motif
Other DBs
NCBI-GeneID:
18883811
NCBI-ProteinID:
XP_007386501
JGI:
54329
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MNVWTEHRNPEGRTYWFNTTTRESVWEKPDDLKTPFEKALNNTKWKEYFSGGRKYYYNTE
TKESKWDMPEELLLLLEKVEKEKSATPTPAPSGAPGMLPAPAGFTPIGQAGALVPGMDLS
VALPTQNGLPISTATTGALPARPNLPEDPVIPHNGFATLEEGEKAFTHLLRKAGVDASWT
WDMTMRTIITDPLYKALNTLAEKKNCWQKYVDGLKAKEQEEREARLAKLRPALRNMLKGN
PNVHHYSTFATADRLFANHPIWQQAKIAEERKLIFEEYIGELKQREMQEQRAARSRAIST
VVALFKQLDVDVLTRWRQAHQMLINSEEWKSNPDLANLPTLDILLAFEDYSRVREREFEE
QMRKQQLEKTRKERKAREGFKALLAELVQSGILKARTKWKQIYPSIKDDDRYLNILGNPG
SNPLELFWDIVDDMDQKLDAKIATVDAALRKAAERKGDKADGADKEKGEVEVFEVKPETT
EEEFKAAVEATGDQEVRKLTSADITEIFRTKLADAQKKQDEERKRAERKQRHMQDDLRYA
LKKLPEPLDVNMSYEDAIPLMQDLPEFKALEDDGRRAAFAKFIKRQKERLREASDDGGST
TSRKRKEPHREKDDYRSERDHHRHSYHDDYDRHRTSTSRDYYKDREYSRGDRDHREKDYK
DYRDYARDSKDYYKSSRSKYESEREERDRDRRRDKDRDRRSDDPYVRERDNPKPTSEHGR
EERERSVSLGYRDREGSTKRDYDDRHDDRVDKVRELFSDRPCIASEI
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttggaccgaacatcgcaatccggaaggccggacctactggttcaacaccacc
actagggagagtgtatgggagaagcctgacgacttgaagactcccttcgagaaagcgctc
aacaacaccaaatggaaagagtacttctctggcgggaggaagtactactacaacactgag
acgaaggagtcaaaatgggatatgccggaggaactcctgctgctcctggaaaaagtcgag
aaggagaaatcggccactcctactccagcgccttccggcgcacctggcatgcttcccgcg
cctgccggcttcactcccatcgggcaagcaggcgcccttgtgccaggcatggatctctcc
gtggccctgccgacccaaaatgggctgcccatctccaccgctacgaccggcgccctcccc
gcgcgccccaacctcccggaagaccccgttataccccacaacggcttcgccactctcgag
gaaggtgagaaggcgttcacgcatctgctcaggaaggcgggcgtggacgcgagctggacc
tgggacatgacgatgcgcactattattaccgatccgctgtacaaagcgctgaatacactg
gctgagaaaaagaattgctggcagaagtacgtcgatggcttgaaggctaaggagcaggaa
gagcgcgaagcccgtctcgccaagctccgccccgccctccgtaacatgctgaaaggcaac
ccgaacgtacaccactactccacctttgccactgctgatcgcctgttcgcgaatcacccc
atctggcagcaggccaagatcgccgaagagcgcaagcttatcttcgaggagtacatcggg
gagctgaagcaacgtgagatgcaggagcagcgcgccgcgcgctctcgtgccatctccacc
gttgtggcgctcttcaagcagctcgacgtggacgtcctcacgcgctggcgccaagcccac
cagatgctcatcaactcggaggagtggaagtcgaacccggatctggcgaacctccccacg
cttgatatactgcttgcgttcgaagactacagccgagtgcgcgagagggagttcgaggag
cagatgcgcaagcagcagctcgagaagaccaggaaggagcggaaggcacgggagggattc
aaggccctcctcgccgagctcgttcagtcaggcatcttaaaggcacgtaccaagtggaag
caaatctatccctccatcaaagatgacgacaggtacctgaacattctcggcaaccctggc
tcgaaccccctcgagctcttctgggatatcgtcgatgacatggaccagaagctggacgcc
aagattgcgaccgttgacgccgcgcttcgcaaagcagcagaacgcaagggcgacaaggct
gacggggcggacaaggagaagggagaggttgaggtgttcgaagtgaaacctgagacgacg
gaagaggagttcaaagccgctgtggaggctacgggggatcaagaggtcaggaaactgacc
agcgcggatatcacagagatctttcggacaaaacttgcggacgctcagaagaaacaagac
gaagagcgcaagcgagcagagaggaagcagaggcacatgcaagacgatctgcgatatgcg
ctcaagaaattgccggagccgctggacgtaaatatgtcctacgaagacgctatcccattg
atgcaagatcttcccgagttcaaggcgctagaggacgatggcaggcgagctgctttcgcc
aagttcatcaagaggcagaaggagcggctgcgcgaagcgtccgatgacggcggttctacc
acgagtcgtaagcgtaaggagccccatcgtgaaaaggacgactaccgctcggaacgggat
caccaccgccacagttatcatgacgattacgaccgccaccgaacctctaccagccgagac
tactacaaggatcgggaatattctcgtggcgatcgggaccaccgcgaaaaggattacaag
gactacagagattatgcgcgggacagtaaggactactacaagagctcgaggagcaagtat
gagagcgaacgcgaagagagagacagagatcggagacgagacaaggatagggacaggagg
agcgatgatccgtacgtccgtgagagagacaacccgaagccgacaagcgaacatggacga
gaagagagggaaaggagcgtaagcctcgggtacagggaccgcgaggggtcgactaaacgt
gactacgacgatcgtcatgatgaccgtgtcgataaggtacgcgagctattctcggacaga
ccctgcatagcgagcgagatatga
DBGET
integrated database retrieval system
