Punctularia strigosozonata: PUNSTDRAFT_54694
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Entry
PUNSTDRAFT_54694 CDS
T03131
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
psq
Punctularia strigosozonata
Pathway
psq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PUNSTDRAFT_54694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psq03021
]
PUNSTDRAFT_54694
Enzymes [BR:
psq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PUNSTDRAFT_54694
Transcription machinery [BR:
psq03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
PUNSTDRAFT_54694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
18883856
NCBI-ProteinID:
XP_007387018
JGI:
54694
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MATLDEEESEWEKLNRTNWRGLGLADPVKNVEDKWLLLPAFLKVKGLVKQHIDSFNYFVD
VDIKNILKANNKVTSDVDPRFWLKYTDIHVGFPDRTDADAIDKSVTPHECRLRDTTYSAP
ILVTIQYTRGKSVVRRPNVSIGRIPIMLRSNKCVLTGRNEAQLARMLECPLDPGGYFVVK
GTEKVILVQEQLSKNRIIVETDPVKDVVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSI
HEDVPIVIALKALGFQADKEILLLTAGNSEVYKSAFSPNLEEAAKLGVFTRHQALEYIGS
RVKVNRRVIGPRRPAWEEAMEALATIVLAHVPVNGLDFRPKAIFVATMTRRVLMAMADEK
MVDDRDYVGNKRLELAGQLLALLFEDLFKTFNSNLKSAIDKVLKKPSRTNEFDAWNTMQF
MGDHITSGFVRAISTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVS
GPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVEEEPIIRIAYLLGVEDICLA
SGAEVYGPHTFVVHVNGTIIGLTRYPARFVSNFRKLRRAGRFSEFVSIYVNHHHSTVHIA
TDGGRICRPMIIVENQRPRVTSDHILLLKKGQVNFDDFLKKGLVEYLDVNEENDSYIALY
EANIVSSTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGFNQLNRIE
TLLYLHCYPQQPMVKTKTIELIGYDKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGY
GRCQVLRKNQTLIRKYPNGTFDRLADAPVDENGGVQKKYDIIQMDGLAGVGERVDPGDVY
INKQTPTNANDNAFVGQAASVPYKNAPMTYKSPVSGYIDKVMITDTENEQTLIKVLMRQT
RRPELGDKFSSRHGQKGVCGLIVNQEDMPFNDQGIVPDSIMNPHGFPSRMTVGKMIELLA
GKAGVLSGKLQYGTAFGGSKVEDMSRILIENGFNYAGKDMLTSGITGEQMEAYVYFGPIY
YQKLKHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERL
MISSDKFEVNACAECGLMGYNGWCTYCKSSKKMAQLTIPYAAKLLFQELMAMNVVPRLEL
DDA
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctcgacgaggaagaaagcgaatgggagaagctcaatcggacgaattggaga
ggcttaggattggcagaccctgttaagaacgttgaggataaatggctgcttctgcctgcc
tttctcaaagtcaaaggtctcgtaaaacagcacattgactcgttcaattactttgtggac
gttgatatcaagaacattctcaaagcaaataacaaagtcacatcggatgtggatccgcgt
ttctggctgaaatatacggacatccatgtgggcttccccgataggaccgacgcggacgcc
attgacaagagcgtcaccccgcatgagtgccgattgcgggataccacgtacagcgcaccg
attttggtgacgatacaatatacacgcgggaagagcgtcgtacgtcggcccaatgtcagc
atagggcgaattcccatcatgctcaggagcaacaaatgcgttcttactggcaggaacgaa
gcgcagctagctcgcatgctggagtgcccgttggatcctgggggctactttgttgtcaag
ggcacggagaaggtcatcctcgttcaggagcaattgagcaagaatcgaatcatcgtggag
acggatcccgtcaaggatgtcgtacaggcctcttgcacatcatccactcatggcggcctg
aagtcgaagacatacgtcgctaccaagaagggcaaaatctatctccgacacaactcaatt
cacgaagacgtcccaattgtcatcgcgctcaaggccttaggcttccaagcggacaaggag
attctactcctgactgcaggcaactcggaggtttacaagtcagcattctcccccaacctc
gaagaagcggccaagcttggcgtgtttactcgccatcaggcgctagaatatatcggaagt
cgcgttaaagtaaacagacgagtcatcggacccaggaggccagcttgggaagaagctatg
gaggcgcttgctacgatcgttctcgcacacgtccccgttaacggactcgattttcgtccg
aaggccatctttgtcgctacgatgacgaggcgtgtgctcatggcgatggcggacgagaag
atggtcgacgatcgagactacgtcggaaacaaacgactggagcttgccggtcaattgctc
gctctgctattcgaggacctcttcaagaccttcaactcgaacctgaagtccgcgatagac
aaggtactcaagaagccatcccggacgaatgagttcgacgcctggaataccatgcagttc
atgggcgaccatatcacgtcgggcttcgtgcgcgccatctcaaccggcaactggtcgctg
aagcgtttcaagatggagcgtgctggtgttacccacgttctgagccggctcagtttcatc
agtgcgctcggtatgatgacgcgaatcagttcgcagttcgagaagaccagaaaggtcagc
ggtcctcgcgcgctgcagccaagtcaatggggcatgctctgtcccagcgatacgcccgaa
ggagaagcttgtgggttggtcaagaatctcgccctgatgacgcatatcaccacggacgtt
gaagaggagcctataatccgcatagcctatctgttaggtgtcgaagatatttgcttggcg
tccggtgccgaggtttacggccctcataccttcgtggtccacgtgaacggtaccatcatc
ggcctgactcgataccccgcacgtttcgtctcaaacttccgcaaactccgtcgtgctggg
cgttttagcgaattcgtcagcatctacgtcaatcaccaccacagtaccgtgcacatcgcg
accgatggcgggcgtatatgtcgaccaatgatcatcgtggaaaaccagcggccacgagta
acatcagatcacatcttattgctgaagaagggccaagttaacttcgacgatttcctgaag
aagggacttgtggagtatcttgacgtgaacgaggagaatgactcgtacattgccctgtac
gaagcgaacatcgtatcgagcaccacgcacctcgagattgaacctttcacaatcctcgga
gccgttgcgggtctcatcccgtatcctcaccacaatcaatctccaagaaatacgtaccaa
tgcgccatgggcaagcaggccatcggagccatcggcttcaatcagctaaaccgcatcgag
acgttgctgtatctgcattgctacccccagcagccgatggtcaagaccaaaacaattgag
ttgatcggctatgacaagttgcccgcgggacaaaatgctaccgttgcagtgatgagttac
tccggatacgatatcgaggacgccttgatccttaataaggcaagtctagatcggggctac
ggaaggtgtcaggtccttcgaaagaaccaaacactaatccgcaagtatcctaatggaact
ttcgatcgattagcggacgctccggtggacgagaacggcggagtccagaagaaatacgat
atcattcagatggacgggctcgccggcgtcggggaacgcgtcgaccccggcgacgtctac
atcaacaagcagacgccgacgaacgcgaacgataatgccttcgtcggtcaagcagcgtca
gtgccatacaagaacgcgccgatgacgtacaagtcacccgtctctggctacatcgacaag
gttatgatcaccgacaccgaaaatgagcagacgctcatcaaggtgctgatgcgtcaaaca
cggcggccggagctcggcgataagttctcctcgcggcatggccagaagggcgtttgcggg
ctgatagtgaatcaggaggacatgccgttcaatgaccaaggcatcgttccagactccatc
atgaacccacacggtttcccgtcccgaatgacggtcggcaaaatgattgaattgttggct
ggcaaagccggagtgctgtccggaaaattacaatacggtacagcctttggcgggtcaaag
gtcgaagacatgtcccggattctcatagagaacggcttcaactatgccggaaaggatatg
ttgacgagtgggatcaccggagagcagatggaagcctacgtctacttcgggcctatctac
tatcagaaactcaaacacatggtcatggacaagatgcacgcccgggcgcgcgggccccgc
gcaactttgacgcgacaaccgaccgaaggtcgctcccgcgagggcggcctgcgccttggc
gagatggagcgtgactgcctcattggctatggcgcgacgcagctccttctggagcgcctt
atgatctcctccgacaagtttgaggtgaacgcgtgtgcggagtgcgggttgatgggctac
aacgggtggtgcacctactgcaaaagctccaagaaaatggcgcaattgacgatcccgtac
gctgctaagcttctgttccaagagctcatggcgatgaatgtggtcccacgactcgaactg
gatgatgcatga
DBGET
integrated database retrieval system
