KEGG   Punctularia strigosozonata: PUNSTDRAFT_57860
Entry
PUNSTDRAFT_57860  CDS       T03131                                 
Name
(RefSeq) Cullin-4B
  KO
K10609  cullin 4
Organism
psq  Punctularia strigosozonata
Pathway
psq03420  Nucleotide excision repair
psq04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PUNSTDRAFT_57860
  09124 Replication and repair
   03420 Nucleotide excision repair
    PUNSTDRAFT_57860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psq04121]
    PUNSTDRAFT_57860
   03400 DNA repair and recombination proteins [BR:psq03400]
    PUNSTDRAFT_57860
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psq04147]
    PUNSTDRAFT_57860
Ubiquitin system [BR:psq04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     PUNSTDRAFT_57860
DNA repair and recombination proteins [BR:psq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      PUNSTDRAFT_57860
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      PUNSTDRAFT_57860
Exosome [BR:psq04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   PUNSTDRAFT_57860
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 18884216
NCBI-ProteinID: XP_007378279
JGI: 57860
LinkDB
Position
Unknown
AA seq 722 aa
MGACLRAALDPQDKLPLPDLPLSYEGFYAGCRYVVTDAEQGEYVYGAVKLELERCIGKLA
NELKNEKIDAVAWIVPFNRACDWFQKRVVLLESLLTYLDKEYVLKYPKFSSIHDLAFELF
SAGIFGDTIIFTKIQDGLRNWVNHERTMRAEHKLRSEIPALLGHLSTHDYYDTFESYLIE
VTRDFYSAEADRLAVELKDKAMEYVLKVEERIAEEEKRGEEVLLPQSRGEFKKATERAFL
LGRLEWIATDALAQCLKERNGNQIAGMYARFARVDGLKILCVAFKAHVQDAVQRIVLDTE
HDADMVPKLVALHGFCKKLLEDAFVDYTSPSTGTSDAPPMKRMNRAFFDALKDAFGSGFK
ARRSKPAEMIAKELDKAMKRGKKDMTEQDFERNVEEVLELCRYTDDKDVFRAFYQRALAK
RLLLARSASDDDEKRILKKLQTDYDPEFSMGDHMFKDLALSKDLYEEYLKSLTGQADPSA
RDLFVTVIQRSSWPFTARTKDAVLPTRMQESLEGYLTFYKNKHKNQKLDFDHALGTATMT
ARFDKGKKELTLTLYQAIVLLLFNDETELSYERIRDSTAMDPTELKRVLQSLACGKKKVL
LKVPPSRDVGDKDVFRYNGEFTDPKHKVHISSILAQDTPEESKRTQKAIEGERRYIIDAA
IVRIMKARKKVKYEQLVTATVDAVKNHFLPDVVDVKKRIEGLVEEEYMRRDEHDRHMFHY
IA
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgggagcatgcctccgtgcggcactcgatccgcaggataagctccccttgccggatctc
cctctgtcctatgaggggttctacgccggctgccggtatgtggtgaccgacgccgaacaa
ggagaatatgtatacggtgcggtgaagctagagctggagaggtgcattgggaagctggcg
aatgagttaaaaaacgagaagatcgacgctgtagcgtggattgtgccgttcaacagggct
tgtgactggttccagaaacgagtcgttctacttgagtcacttctcacctatcttgacaag
gagtacgtgctcaaatacccaaagttcagttcaatccacgaccttgcctttgagctcttt
tcagccgggatcttcggtgacacaataatcttcaccaagatacaggacggtttacgaaat
tgggtcaatcatgagcgaacaatgagagccgaacataaattgcgctctgagattcctgct
ctgttgggacatcttagcacccacgactactatgatacgttcgagtcgtacttgatcgag
gtcacccgcgacttctactccgccgaggccgaccgacttgctgttgaactgaaggacaag
gcgatggagtacgtgctgaaagtcgaagagcggatcgcggaagaggagaaaaggggcgag
gaagtgttactcccgcagagcaggggcgagttcaagaaagcaacggaacgagcgttcttg
ctgggaaggctggaatggatcgctacggatgcactggcacaatgcttgaaggaaagaaac
ggcaatcagattgcagggatgtatgcccgcttcgcgcgcgtggacggtttgaagatactg
tgtgttgcgttcaaagcgcatgtccaggacgcggtgcagagaatcgtccttgacacagag
catgacgcggatatggtgccgaaactcgttgctctacatggtttctgcaagaagctcctg
gaagacgcttttgtggattatacctctccttctacgggcacttccgacgcgccgcccatg
aagcgcatgaatcgcgccttcttcgatgccttgaaagacgcgttcggctctggcttcaag
gcgcgccggtcgaagccggcggagatgatcgccaaggagctcgacaaggcgatgaagcgc
ggcaagaaggacatgaccgagcaggatttcgagcggaacgtcgaggaggtgctagagctg
tgcagatacacggacgacaaggacgtcttccgcgcgttctaccagagggcgctggcgaag
cggctgctgctcgcccggagcgcgagcgacgatgatgagaagaggatactgaagaaattg
cagacggattatgatcccgagttcagcatgggtgatcacatgttcaaagatcttgctctc
tcgaaggacctgtacgaggagtacctgaagtcactcactggccaggcggatccttcagca
cgcgaccttttcgttactgtcatccagcgcagctcatggccattcacggcgcggaccaag
gacgccgttttgccgaccaggatgcaggaatcattggagggttatcttacgttctacaag
aacaagcataagaaccaaaagcttgatttcgaccacgctctcggcactgcgacaatgacg
gcacggttcgacaaggggaagaaggaacttaccctcaccctctaccaagccatcgtcctc
ctgctatttaacgatgaaaccgagcttagctatgagcgcattcgagattcaacggccatg
gacccgacggagctgaagcgtgtgttgcaaagtttggcgtgcgggaagaagaaagtgctc
ttgaaggttccgcctagcagagacgtaggagacaaggacgtgttccgctacaatggcgag
ttcaccgacccgaaacacaaggtccacatcagcagcatcctggcgcaggacacgcccgaa
gagtcaaagcgcacccaaaaggccatcgaaggcgaacgtcgttacatcattgacgctgcg
attgtgcgcatcatgaaggcgcgcaagaaggtgaaatacgagcagctagtgacggccacc
gtcgacgcggtcaagaaccatttcctccctgacgtggtcgacgtgaaaaagaggatcgag
gggctggtggaggaggagtatatgcgtcgcgacgagcacgataggcatatgttccattac
attgcataa

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