Punctularia strigosozonata: PUNSTDRAFT_59078
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Entry
PUNSTDRAFT_59078 CDS
T03131
Name
(RefSeq) RNI-like protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psq04121
]
PUNSTDRAFT_59078
Ubiquitin system [BR:
psq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PUNSTDRAFT_59078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_At5g56370
F-box-like
DUF7885
F-box
Motif
Other DBs
NCBI-GeneID:
18884304
NCBI-ProteinID:
XP_007379341
JGI:
59078
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MAGASSPVSIGKGKGRSEDPPVLPPLAFTPMEVGYGRIDWPSPSSASGPSPSSVGSGYLS
THHPVTSEEHPSSPGSPCQPSIPRHRRSLSDLSIHSARSLSALSLSKIRVKLGSSRKSGT
TRMALFGRPKGYGSPSNLATSTPGSPEIVNPEGIPDDTFTIEVGHGGGCFSPCIGDLRVS
PNIEGLITSVGESPYPPYRPSHEVAVLKGKTRSYSSPFPLSAAQSPLLSVPAAEVSVPVP
VPVHNYFEEWLPRELQLYVLSTVVDLHEMERRRLEGGKTWSVRRAESPKYRYMGRDKGIR
ELVKFSRVSKYWQSLVFDGALWKNFDFHSFSKTTASALLRVAQMAGTFTTRVDLSGHAHL
SPSTLQAVTDHFSLRPAHITGVAYTRLTHVKLFGCSSLTTRSLQNLLMHSPSLEHLCVKG
IAAVTDFICDLLAVYCPALMSLDMSRCPNLSGAGIRRMSDSVIIRGERLRLRELRLSGIN
FVDDNVMEALGRAAPNLEVLDLSYARHLHNSAIAAFVKVSEDDDIDGQHSVLLTPREAGR
DPTESAKYRRRVTALRHLNLSSCMWLTDVACSNLAHAVPRLEFLEIAGIGAELKEEGLIH
LLKTTPLIRKLDLEDASAVTDNLIDALAPDAEGSSQKTGTTSPPRTGERLEHLIISYASA
VTDEALLNLIRRCTKLRVLEADNTHISRSVMQEFVRLSRQRQTVDAKLVAVDCRHIAERD
VKDLTPLTRPRMGWRGYDARKLGFLDERDDEGLDVGQDECDQQRVVLKTFYSWQTVDAVR
AAREKKRKGKSRRNINNSDGSIDGDSTIGRDGTRTRWWSPGGRRNGTVSPTFLDLNDREG
CIVM
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggctggagcgtcgtcgcccgtctcaatcggcaaaggcaaggggcggtcggaggatcca
cctgttcttccacctcttgctttcacgccaatggaggttgggtacggtcgtatcgactgg
ccgagtccatctagcgcatcgggtccctctccttcatccgtgggttccggctatctgtcc
actcatcaccctgttacctcagaagagcaccccagtagtcccggaagcccttgtcagccc
tccatcccccgccacagacgatcactctccgacttgtcgatacattccgctcgttccttg
tcagcgctgtcgctgtcgaagattcgcgtgaagctgggttcgtcccggaaatcgggtaca
accaggatggccttgtttgggaggccaaaaggttacggatccccgtcgaatcttgccacc
tccactccaggctctccggagatcgtcaatcctgaagggattcctgacgacaccttcacg
attgaagtaggacacggcgggggctgcttttcaccatgtatcggagacctcagggtcagc
cctaacattgaaggcctcataacgtccgttggcgaatctccctatccgccttatcgacct
tcccacgaagttgctgtgctgaagggaaagactcgctcttactcctctccatttcccttg
tcggctgcgcaatctcccttgctatcagtaccagcagcagaagtctcggtccctgtaccg
gttccagttcacaactacttcgaggagtggcttccccgagagttgcagctatatgtcttg
tccactgttgtcgatcttcacgagatggaacgaaggagactggaaggaggtaaaacatgg
agtgttcgcagggccgagtctccgaagtatagatatatgggcagggataagggaatccgt
gagctggtcaagttcagcagggtttccaagtattggcaatcactggtgttcgatggggcc
ctctggaagaatttcgacttccattccttctcgaaaacaacagcgtctgcactactgcgc
gtggcgcagatggccggcacgtttactacgagagtggatctatcgggtcatgcgcattta
tctccttctactctccaggccgtgacggatcatttttctcttcgccctgcgcatatcaca
ggagtcgcgtataccagactcactcacgtcaaactgttcgggtgttcgtcattgacgacc
agatcgttgcaaaacctgttaatgcattccccgtcgctggagcatctctgcgtcaaaggt
attgcggcggtgacggacttcatctgcgacctcctcgccgtgtattgtcccgcgttgatg
tcgctcgacatgagccgatgcccgaaccttagtggtgccggcatccgaagaatgtcggac
tccgttatcattcgaggggagcgtttgcgcttgagggagctgcgtttgtctggcatcaac
ttcgtggacgacaacgttatggaggctctcgggagggctgcgcctaatctggaggttctc
gaccttagctacgctcggcatctccacaactcagcgatcgctgcattcgtgaaggtttcg
gaggatgatgacattgatggacagcattcagtcttgctcactcctcgagaggcaggacgg
gatccaaccgagtccgcgaagtataggagacgtgtcacagcactccgccacctcaacctc
tcatcctgcatgtggttgacggatgttgcctgttcgaaccttgcccatgccgttcctaga
ctcgagttcctcgaaatcgccggcatcggcgctgaattgaaagaggagggtctcatccac
cttctgaagacgactcctctcatcaggaaacttgacctagaggacgcctctgcggtcacg
gacaatctgattgacgccctcgcacccgatgccgagggttcatcgcagaagaccggaacg
acatccccaccacgcacaggcgagcggcttgagcatctcatcatctcgtacgcatccgcc
gtcacggacgaggctctgctcaacctcatccggcgatgcaccaaattgcgcgtgctcgag
gccgacaacactcacatctctcggtcggttatgcaagagtttgtccgactgtctcgtcaa
cgtcaaacggtagacgcgaagttggtggcggtcgactgtcgtcacattgccgaacgtgat
gtcaaggatctgacgcccctgacccgacctcgcatgggctggcggggatatgatgcgagg
aaactcgggttcctggatgagagggacgatgagggcctggatgtcggtcaagacgaatgc
gaccaacaacgggtggtcttgaagacattttactcgtggcaaacggtcgatgcagtcagg
gcggcgagggagaagaagcgcaagggcaagtcgaggcggaacatcaacaattctgatggc
agtatcgatggtgattctacaatcggcagggatgggactcgcaccaggtggtggtcgcca
ggaggtaggcggaacggtacggtctccccgacatttctcgatctcaacgatcgtgagggc
tgtatagtaatgtga
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