Punctularia strigosozonata: PUNSTDRAFT_62636
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Entry
PUNSTDRAFT_62636 CDS
T03131
Name
(RefSeq) prokaryotic type I DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
psq
Punctularia strigosozonata
Pathway
psq03440
Homologous recombination
psq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PUNSTDRAFT_62636
03460 Fanconi anemia pathway
PUNSTDRAFT_62636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psq03032
]
PUNSTDRAFT_62636
03400 DNA repair and recombination proteins [BR:
psq03400
]
PUNSTDRAFT_62636
Enzymes [BR:
psq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PUNSTDRAFT_62636
DNA replication proteins [BR:
psq03032
]
Eukaryotic type
DNA Topoisomerases
PUNSTDRAFT_62636
DNA repair and recombination proteins [BR:
psq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
PUNSTDRAFT_62636
FA (Fanconi anemia) pathway
PUNSTDRAFT_62636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
18884596
NCBI-ProteinID:
XP_007380820
JGI:
62636
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MHILCVAEKPSMSRSLAVILSGGRYTTRATRNKFIKNYDFDYPQANATMTMTCVSGHLME
HDFPPDYGWRSCNPFALFDAPVQTKASDASIVSNLSAEARRAQQLMIWTDCDREGEHIGS
EVAAVCVKANPRIVVKRARFSAVIAQQIHNAAQHPVELDQAQADAVEARIILDLRIGASF
TRMQTFALQRSFAEIKDTVSYGPCQFPTLGFVVARYKQVKAFVPETFWYIYFALRREGDE
IQFTWKRGHIFDYDFALTLYEGVLTDRLATVTKVTKKATKKWKPLPLTTVELQKAGSRLL
RMAPKKVLDIAEKLYQQGFLSYPRTETDQFDRQFDFMSLIQKQTVDPAWGQFATQLQGGG
FATPRRGKHDDKAHPPIHPTAHAANLAGDEKKVYEFVTRRFLACCSKDAEGWQTTVDVEY
GGEQFSATGARIATAGLVVTERNYLLVYPYDKWTGKELPEFREGEQFQPSVCELRDGETS
KPHYLTEADLVGLMDKNGIGTDATIAEHIHKVIEREYVVERMEGSTKYLLPSTLGLGLVE
GYSQIGFERSLDKPQLRRETERNMVQVCERRKTKQDMLAENIEQYKDMFIRAKRDFNRVM
DVRTLYPASETGYRRIKLQSVRQNLNHNSDDPAPGGGGGGGGGGGAGGGGGGGGGGRGGG
PATGNRGGGGPARNRRGGGGGGGGPPSARGRAPPPDEPDDGERFVFPG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcatatactctgcgtagccgaaaagccctccatgtcccgttcacttgcagtgatactt
tcaggcggtcgatataccacacgcgcgacccggaacaagttcatcaagaattatgacttt
gactatccccaagcgaacgcgacgatgaccatgacctgcgtctcgggccacctcatggag
cacgacttcccccccgattacggctggcggagctgcaatccgttcgcgctcttcgacgcc
cccgtgcaaaccaaagcctctgacgccagcattgtctcaaacctctccgccgaggcgcga
cgcgcacagcagctcatgatctggaccgattgcgatcgcgaaggagagcacatcggctcc
gaggtcgctgccgtctgcgtcaaggcgaatccccgcatagtcgtcaagcgcgccaggttt
agtgccgtaatcgcgcagcagattcacaatgcggcgcagcatcccgttgagctcgaccag
gcgcaggcagacgccgtagaagcgcgcatcattctggaccttcgcatcggtgccagcttc
acccgcatgcagacgttcgcccttcaacgaagtttcgcagagatcaaggacactgtgtcg
tacggtccgtgtcagtttccgacgctcggcttcgtcgtcgcgcgctacaagcaagtcaaa
gccttcgtacccgagacgttttggtacatctacttcgcgctacggcgcgaaggcgacgaa
atccaattcacgtggaagcgcggacacatctttgactacgacttcgcgttaacgctgtac
gagggcgtgctcaccgatcggttggcgacagttacgaaagtcacgaagaaggctacgaag
aaatggaaaccgcttcctctgacgacggtcgagttgcagaaggccggctcaagattgctc
aggatggccccaaaaaaggtccttgacatcgccgagaagctgtatcaacaaggcttcctc
tcttacccaagaacggagaccgatcaatttgaccgccagttcgacttcatgagcctgatc
cagaagcagaccgtcgatcctgcctggggtcaattcgccactcagctccaaggaggcgga
tttgccacaccgcgaaggggcaagcacgatgacaaggcgcacccgcccatccaccccacc
gcccacgccgccaacctcgccggcgacgagaagaaggtatacgagttcgtcacccgccgc
tttctcgcgtgctgctcgaaggacgccgagggctggcagacgacggtcgacgttgagtac
ggcggcgagcagttttccgccaccggtgcacgaatcgctactgcaggcttggtggtgact
gagaggaattacctgctcgtgtacccgtacgacaagtggacgggcaaagagctacccgaa
ttccgagagggcgaacagttccagccgagcgtgtgcgagctccgagatggcgagacgtcc
aagccgcattatctgaccgaagccgacctcgtcggactcatggacaagaacgggatcggg
acggacgcgacgatcgctgagcacatacacaaggtgatcgagcgcgagtacgtcgtggag
cgtatggagggatcgaccaagtatctgcttccgtccactctcggtctcgggctggtggag
gggtacagccagatcggcttcgaacgcagtctggacaaaccgcagctcagacgagagacg
gagcgtaacatggttcaagtgtgtgagcggcgcaagactaagcaagatatgctcgcggag
aatattgagcagtacaaggacatgtttattagagcaaaacgcgacttcaacagggtcatg
gacgtgcgtacactttaccctgcctcggagacaggttatcgacggataaaactgcagagc
gtccggcagaatctgaatcacaacagtgatgatcctgcgcccggaggcggaggcggaggc
ggaggcggaggcggagcaggaggaggaggaggaggaggaggaggaggaagaggaggagga
ccggccactggtaacagaggtggagggggacccgcccggaaccggagaggcggtggtggt
ggtggcggcggccctccttctgcacgaggacgagctccaccacctgacgaaccagatgac
ggtgagagattcgtgtttcctggttag
DBGET
integrated database retrieval system
