Punctularia strigosozonata: PUNSTDRAFT_62947
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Entry
PUNSTDRAFT_62947 CDS
T03131
Name
(RefSeq) histone deacetylase clr3
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psq01009
]
PUNSTDRAFT_62947
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_62947
04131 Membrane trafficking [BR:
psq04131
]
PUNSTDRAFT_62947
03036 Chromosome and associated proteins [BR:
psq03036
]
PUNSTDRAFT_62947
Enzymes [BR:
psq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
PUNSTDRAFT_62947
Protein phosphatases and associated proteins [BR:
psq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
PUNSTDRAFT_62947
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
PUNSTDRAFT_62947
Membrane trafficking [BR:
psq04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PUNSTDRAFT_62947
Chromosome and associated proteins [BR:
psq03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
PUNSTDRAFT_62947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
VirJ
Motif
Other DBs
NCBI-GeneID:
18884624
NCBI-ProteinID:
XP_007380856
JGI:
62947
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MDVDGNRPEAVSTDRDPIPHISHQRASSEPIDFRLPRHSIGYVFDARMMAHSCLDGHPEQ
PERIVSIYRLLAENGCLEKMKHIPIRMVKKQEALLVHSEELWDKVLAISRLRAQDIEDTK
RYYELMSLYVNPHTPSAARLSCGGVIEATLAVARGEVRKSFAIVRPPGHHAEPEEHMGFC
FFNNVAVAVRVAQQLTKIRKVLILDWDIHHGNGTQKAFNDDPDVLYISLHRYDAGQFYPS
TTFGAMNSCGEGPGIGFSVNIPWPGPGMRDADYLHAFQKIVMPIAIEFAPELVIISAGFD
AADGDELGECHVTPTGYAHMTHMLSSLAGGKLVVALEGGYNLQSIANSSLAVAKVILGEA
PPQIAPMVASELGTETVWQVARQQSKWWKNVDPKACEPKSEVGDIAYSIPEILKAHRQSY
LYETHKLHTIPLLPAYEELFSAQVACTADILDNPTLIVFVHGFGEMRVELEGAMTCNMDL
ERSYLLDVSKKMIEWVRVEGYGLIDLNILENVPKSATPVRWRARTGTLNRNLLTYMWDNY
IQLSKAKQVVLIGHGPGCDVVIETISERASSVPKIVIAVIQVVGLSKLPLLPKKSMEILG
WYRACSQVFVPKNHPIFSEGKILGRHGHVIASGTLAVRVDLIWLIIQIYRRGTSYQNALS
GTAGHPRIHQEQTRFRGGRSDAIRWIV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggacggaaatcgtcccgaggcagtgtccactgaccgcgaccctatacctcac
atatcccaccaacgcgcttcatcggagccaattgatttcaggttgcctcgacacagcatt
ggctatgtgttcgatgcgcggatgatggcccatagttgtctcgatgggcaccccgaacaa
cctgaacgtatagtatcaatatatcgtctcctggcggaaaacggatgcttagagaagatg
aagcacattccaatacgaatggtcaaaaagcaggaggctttacttgttcatagtgaagaa
ctctgggacaaggtccttgctatatccaggcttcgtgcacaggacatcgaggataccaag
cggtactacgagctgatgtcgctttatgtgaacccacataccccatctgcagcacgtctt
agttgcggtggagttatagaagcaactttagctgtggcgcggggcgaagtacgaaaatcg
tttgcaatcgttcgccctcctggacaccatgcggagcctgaggagcacatgggcttctgt
ttcttcaataacgtcgctgttgcggtaagagtggcacagcaactcaccaagatcaggaaa
gtcttgatattggattgggatattcatcatggaaacggcacacaaaaagcgttcaacgat
gaccccgatgttctgtacatatcgcttcatcgatacgacgctggacagttctatccgtcg
accacattcggggcgatgaattcctgtggagaagggccgggaatcggcttctcagtgaac
ataccttggcctggtcccggtatgcgagacgcagactatttgcatgccttccaaaagatc
gttatgccgatagcgatagagttcgctcccgaactagtcatcatctcggctgggttcgat
gcggcggatggggatgagcttggcgaatgccatgtaacacccactggatacgcacatatg
acacatatgctttcgagcttagcaggtggcaagctcgtcgttgctttggagggaggctac
aacttacagtcgattgcgaactcctctctggctgtggcgaaggtgatactaggggaagcg
ccgccccagatcgcgccgatggtggccagtgagctcgggacagagacggtctggcaggtc
gcacgtcaacagagcaagtggtggaaaaacgtggatccaaaggcttgcgaaccaaaatca
gaggtgggcgatattgcgtattccatcccagagatcctcaaggcacatcgacaaagctac
ttgtatgaaacgcacaagctccacaccattcccttacttcctgcgtatgaggaattgttc
tccgcccaggtcgcgtgcacggcagatatccttgataaccccacgttgattgttttcgta
cacgggttcggcgaaatgcgtgtcgaacttgaaggtgccatgacatgtaatatggatttg
gaacgttcttacctgttagatgtatcgaaaaaaatgattgaatgggttcgtgtggaggga
tacggccttatagacctaaatatccttgaaaatgtcccgaagagcgcgactccggtgagg
tggcgcgccaggacaggaaccttgaacagaaatcttctgacgtatatgtgggacaactac
atacaattatcaaaggcgaagcaagtggttttgatcggccatggtccgggttgtgacgta
gtcattgagacgatcagcgagcgggcttctagcgtgccgaaaatagtgatcgcagtcatt
caagtcgtagggctcagcaaactgccacttttaccgaagaaatctatggaaatccttggc
tggtacagagcttgctctcaagttttcgttcccaaaaatcatccaatattttcagaggga
aaaattctgggcaggcatgggcatgtcatagctagcggtacgcttgcggtcagggtcgat
ctcatttggctgattattcaaatctacagacgaggaacgagctatcagaatgctctctct
ggaactgccggtcatccaagaattcatcaagagcaaactcgtttccgaggtggtagatca
gatgcaatccgttggattgtctga
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integrated database retrieval system
