Punctularia strigosozonata: PUNSTDRAFT_65474
Help
Entry
PUNSTDRAFT_65474 CDS
T03131
Name
(RefSeq) WD40 repeat-like protein
KO
K12857
Prp8 binding protein
Organism
psq
Punctularia strigosozonata
Pathway
psq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PUNSTDRAFT_65474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psq03041
]
PUNSTDRAFT_65474
Spliceosome [BR:
psq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PUNSTDRAFT_65474
Complex C
U5 SnRNP specific factors
PUNSTDRAFT_65474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
TibC_1st
PQQ_3
Motif
Other DBs
NCBI-GeneID:
18884856
NCBI-ProteinID:
XP_007382560
JGI:
65474
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSKRSASPSQSGALVKRARGSPQPETQLAISSSNDARQQALIRTVKRTSNLDAPIVSLSG
AHSAEILSCRFDPTGQNIAACSSDRSVSLWRTYPPNTNYALLSSLHKAPILDLQWSLISP
LLYTASADHTIIYTDLSTGERVRRIRAHRGVINSIDRVVAGGAGTELLATAADDGTVKVW
EGGDEGSKEAIATFHVGCPVTSVCWSLDGTTIYAGALDNEIHIYDLRKQAELSTLSGHTD
TPTSLSLSPNGEYLLSPSFSSTTLIHDIRPFSPSPNRIHRSLQGAPAGFENTLLRGNWSR
DDGGKRVAVGGADRTVCIWDVESGRVLYKLPGHKGTVTAVDFHPKEPVILTGSKDATLLV
GEIEPSVGA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggtctgcttcgccatcgcagtcgggagctctcgtcaagcgagcgcgcgga
agcccacaacccgagacccagcttgcaatctcctcatctaatgatgcgcggcaacaggcc
ctcatccgcaccgtgaagcgtaccagtaacctggacgcgcccattgtcagcttgtctggc
gcgcactctgccgagatcctcagctgcaggtttgaccccacgggacaaaacattgctgca
tgctcaagcgaccgaagcgtttccctttggcgcacataccctccgaacacgaactatgct
ctcctttcatcgttacacaaggcgcccatcctcgacctacagtggtctcttatatcgccg
ctcttgtacaccgcgtcagcagaccatacgatcatctacacggacctcagcacgggcgaa
cgcgtccggcgcatacgtgcccaccgaggcgtaatcaacagcatagacagggtcgtagca
ggcggcgctggcactgaactcctcgcaaccgcggctgacgacggcacggtcaaggtgtgg
gagggtggagacgaaggttccaaggaggcaattgcgactttccacgtcggctgcccggtg
acgagcgtatgctggagcttggacggaacaaccatctacgcaggcgcgctcgacaatgaa
atacacatatatgatttgaggaaacaagccgagctgtctactctctcgggtcacaccgac
acgccaacatcgctttcgctgtcacctaacggcgaatacctcctctccccgtcgttctcc
tcgaccaccctcattcacgacatccgtccattctcgccctcacccaaccgcatacatcgt
tctctccaaggcgcaccagcgggcttcgaaaacaccctcctccgcggcaactggagccgc
gacgacggtgggaagagagttgccgtgggtggagctgaccggacggtgtgtatctgggac
gttgagagcgggcgggtcctttacaagttgcccggacacaagggcaccgtcaccgccgtg
gatttccatccaaaggagcccgttatcctcacgggaagcaaggacgccacgctcttggtg
ggcgagattgaaccttccgttggcgcgtaa
DBGET
integrated database retrieval system