Punctularia strigosozonata: PUNSTDRAFT_68656
Help
Entry
PUNSTDRAFT_68656 CDS
T03131
Name
(RefSeq) SWIRM-domain-containing protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
psq
Punctularia strigosozonata
Pathway
psq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PUNSTDRAFT_68656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psq03021
]
PUNSTDRAFT_68656
03036 Chromosome and associated proteins [BR:
psq03036
]
PUNSTDRAFT_68656
Transcription machinery [BR:
psq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
PUNSTDRAFT_68656
Chromosome and associated proteins [BR:
psq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
PUNSTDRAFT_68656
PBAF complex
PUNSTDRAFT_68656
GBAF(ncBAF) complex
PUNSTDRAFT_68656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
MDM1
Motif
Other DBs
NCBI-GeneID:
18885091
NCBI-ProteinID:
XP_007384413
JGI:
68656
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
AASLTDTRATSETMDSPPPARRSSSPGASPEAKRVKLTVNQGATPVDPDTAPGKRGELEP
LQSSDIGNLPPTAAPEPGPANGGAVRVLGEKEGGAAGEDVEMAEEGEKDDEDGGGDSNDD
ADEDDPAALEAARARLEEQARRYLAAQTHEVIIPSYAAWFDMAKIHPVERRALPEFFNSR
NRSKTPSVYKDYRDFMINTYRLRPTEYLTVTACRRNLAGDVCAIMRVHAFLEQWGLINYQ
IDPDTRPATLAPPFTGHFRVILDTPRGLQSLHPGTRPSQNPTSAPARDQKPPQPSSASTA
SASLELRSSIYQTTAKASRPVSAAEASSLANGASDSSGRRATMHACDTCGVDCTPVRYHS
LKVKDFELCPPCYLDGRFPSSMFSGDFVRLTNAAHASGNQHANSNEAAEDDWTDQELLLL
LEGIEMYDDDWSAVEEHVGTRSAQQCVRKFLEMPIEDPYVQREEADAGPLRFGRVVPFER
ADNPVMSVVAFLAGVVSPGVASEAAKEALKELVKEDKEGIEKEEKEEKEAGEKEKEGEGE
EESKEGVNEKENEKEGGEASGGAAKDGEDGMNVDVGASSSTSAPASGAAKKTPKIPRSQV
QRAASLALSASAKAAGALASAEDAAIRSTLGQLVKLTLTKLELKMAQFEELEEVLEEERR
GLESARMALVAERTQVKRVLEGIKAEIAKHGPTAGGQLGQVVGQNGGMGTSGQGTRVGEV
QGPVEGAGGPVEGGNLASLA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gctgcttctctcaccgacacacgagccacatccgaaacaatggactcgccgccgcccgcc
cgccgctcatcgtcgccgggtgcatccccggaggcgaaacgcgtcaagctcaccgtcaac
cagggcgcgacccccgtcgacccggacaccgccccgggcaagcgcggcgagctcgagccc
ctccagtcctccgacatcggcaacctgccgccgaccgccgcccccgagccggggccggcc
aacggcggtgccgtacgcgtgctgggcgaaaaggaaggaggagcagcaggggaggacgtc
gagatggcggaagagggggagaaggacgacgaggacggcggcggggacagcaacgacgac
gcggacgaggacgaccccgccgcgctcgaggccgcgcgcgcgcgtctcgaagaacaggcc
cggcgctacctcgccgcccagacgcacgaggtcatcatcccctcctacgccgcctggttc
gatatggccaagatccaccccgtcgagcgccgcgcgctccccgagttcttcaactcgcgc
aaccggtccaagacgccgtcggtgtacaaagattaccgcgactttatgatcaacacctac
cgcctccgcccgacggagtacctcaccgtcaccgcctgccggcgcaacctcgccggcgac
gtgtgcgccatcatgcgcgtgcacgcgttcctcgagcaatgggggctcatcaactaccag
atcgacccggacacgcggccggcgacgctcgccccgcccttcacgggccacttccgcgtc
atcctcgacaccccgcgcggtctacaatccctgcaccccggcacccgtccttcccaaaac
cccacctccgcacccgcacgggaccaaaagccgccgcaaccgtcctcggccagcaccgcg
tcggcctcgctcgagctccgctcttccatctaccaaacgacggccaaagcctcgcggccc
gtctccgccgccgaagcctcctcgctcgcgaacggcgcctccgactcgtccggccggcgc
gcgacgatgcacgcctgcgacacgtgcggcgtcgactgcacgcccgtgcggtaccacagc
ctcaaggtgaaggactttgagctctgcccgccgtgctacctcgacggccgcttcccgagc
tcgatgttttccggcgacttcgtgcggctcacgaacgcggcgcacgcgtcggggaaccag
cacgccaactcgaacgaggcggcggaggacgattggacggaccaggagctgctgctgttg
ctggaggggatcgagatgtacgacgacgattggagcgcggtcgaggagcacgtggggacg
cgcagtgcgcagcagtgcgtgcgcaagtttttggagatgccgatcgaggacccgtacgtg
cagagggaggaggcggacgcggggccgttgaggtttgggagggtggtgccgtttgagagg
gcggataatccggtgatgagcgtcgtggcgtttttggcgggcgtcgtgagccctggggtg
gcgagcgaggcggcgaaggaggcgttgaaggagctggtgaaggaggataaggaggggatc
gagaaggaggagaaggaggagaaagaggcgggagagaaggagaaggagggcgagggcgag
gaggagtcgaaggagggggtgaacgagaaggagaacgagaaggaaggcggagaggcgagc
gggggagcggcgaaggatggtgaggacgggatgaacgtcgacgtcggcgcgtcgtcgtcg
acatctgctcccgcctcgggcgctgcgaagaagacgccgaagattccgcggtcgcaggtg
cagcgcgcggcgtcgctcgcgctgtcggcctcggccaaggcggcgggcgcgctcgcgtcg
gccgaggatgcggcgatccggtcgacgctcggccagctcgtcaagctcacgctcaccaag
ctcgagctgaagatggcgcagttcgaggagttggaggaggtgctcgaggaggagcgccgg
gggctggagagcgcgcggatggcgctcgtggcggagaggacgcaggtgaagcgggtgttg
gaggggatcaaggcggagatcgcgaagcatgggccgacggcgggcggtcagctcgggcag
gtggtgggacagaatggggggatggggacgagtgggcaggggacgcgcgtgggcgaggtg
cagggccccgtcgagggtgctggcgggccggtggagggcggcaatttggcgtcgttggcg
tga
DBGET
integrated database retrieval system
