Punctularia strigosozonata: PUNSTDRAFT_77897
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Entry
PUNSTDRAFT_77897 CDS
T03131
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10755
replication factor C subunit 2/4
Organism
psq
Punctularia strigosozonata
Pathway
psq03030
DNA replication
psq03410
Base excision repair
psq03420
Nucleotide excision repair
psq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PUNSTDRAFT_77897
03410 Base excision repair
PUNSTDRAFT_77897
03420 Nucleotide excision repair
PUNSTDRAFT_77897
03430 Mismatch repair
PUNSTDRAFT_77897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psq03032
]
PUNSTDRAFT_77897
03036 Chromosome and associated proteins [BR:
psq03036
]
PUNSTDRAFT_77897
03400 DNA repair and recombination proteins [BR:
psq03400
]
PUNSTDRAFT_77897
DNA replication proteins [BR:
psq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PUNSTDRAFT_77897
DNA Replication Termination Factors
ELG1-RFC complex
PUNSTDRAFT_77897
Chromosome and associated proteins [BR:
psq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PUNSTDRAFT_77897
DNA repair and recombination proteins [BR:
psq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PUNSTDRAFT_77897
Check point factors
HRAD17(Rad24)-RFC complex
PUNSTDRAFT_77897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_11
AAA_2
AAA_assoc_2
AAA_16
AAA_24
RuvB_N
SLFN-g3_helicase
AAA_5
AAA_30
AAA_14
AAA_28
Mg_chelatase
AAA_7
AAA_19
DEAD
ResIII
DUF815
DNAX_ATPase_lid
bpMoxR
AAA_25
IstB_IS21
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
18885761
NCBI-ProteinID:
XP_007389092
JGI:
77897
UniProt:
R7RZR5
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MAANFFKPQQKRGVPVQQVQAAELENQPWVEKYRPKTIEDVSAQEHTVAVLRKTLTSTNL
PHMLFYGPPGTGKTSTILALARQLFGPDNFRSRVLELNASDERGISIVREKIKNFARQTP
RAQAVSSDGKTYPCPPYKIIILDEADSMTQDAQAALRRIMENYARITRFCLVCNYVTRII
EPLASRCSKFRFKPLDPTSTSSRLQHVADAERVPVTPAVLDTLVSASQGDLRRSITYLQS
ASRLSASTDPPIPITPTDIQEIAGVVPDAVVKNFARVLGVDNRARKKGFDNIREKVREIM
REGYSASQLLSQLHDLIILHPTLTARHKSRCAMVFAEADKALCDGADEELWILEVALKVH
RACS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaatttcttcaagcctcaacaaaaacgtggcgtgccagtgcaacaagttcaa
gcagcggagctagaaaatcaaccttgggtcgagaaatatcgaccaaagaccatcgaggat
gtttcggcacaggaacatacagtcgctgtgctacggaaaaccttaacatctaccaatctt
ccccacatgctcttctacggcccaccgggtaccggcaagacctccaccatcctcgctcta
gcccgtcagctatttggccctgacaacttccgctctcgcgttctcgagttgaacgcctcc
gacgaacgcggtatcagcatcgtccgcgagaagataaagaactttgcacgccagacaccc
cgcgcacaggccgtctcaagcgacgggaaaacgtacccatgtccgccatacaaaatcatc
atcctcgacgaagcggatagcatgactcaagacgcgcaggcggccttgcgccgaattatg
gagaactatgcgcgcatcacccgattctgcttggtctgcaactacgtgacacggataata
gaacctctcgcttcccgctgctccaagttccgcttcaagccgctcgaccctacttccacc
tcttcccgcctccaacacgttgccgacgccgagcgagttcccgtcacccctgccgtcctc
gataccctcgtctccgcatctcagggcgacctccgacgctccatcacctacctccagtcc
gcgtctcgcctttccgcgtccaccgaccccccgatccccatcacgccaacggacatccag
gagatcgcgggcgtcgtgcccgatgcggtagtcaagaacttcgcaagggtattgggggtc
gataacagggcgcggaagaagggtttcgacaatattcgggaaaaagtcagggagatcatg
cgcgagggttactccgcgtcccaattgctgtcacagctacatgacttgatcatcttacat
ccgacgcttacagcgcgacataagtcgcggtgcgcaatggtgttcgcagaggcggacaag
gcattatgcgatggtgccgacgaggagctttggatattggaagtcgcgctgaaggttcac
agagcatgttcttga
DBGET
integrated database retrieval system
