Punctularia strigosozonata: PUNSTDRAFT_78817
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Entry
PUNSTDRAFT_78817 CDS
T03131
Name
(RefSeq) ku80-like protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
psq
Punctularia strigosozonata
Pathway
psq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PUNSTDRAFT_78817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psq03400
]
PUNSTDRAFT_78817
DNA repair and recombination proteins [BR:
psq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
PUNSTDRAFT_78817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
VWA
VWA_2
Motif
Other DBs
NCBI-GeneID:
18885844
NCBI-ProteinID:
XP_007378239
JGI:
78817
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MPAERAGYTVTMFLVDISPSMGKLREVELPPGPKGERRTTEVTNLEWGLQFVKLKIQEMI
FHGRKTEQCGVILFGTEETHNLVHDQMKSGYEHVSEYIPISQPNAGTLAKLSKLQPSEVS
GDPIDALIVGLEAQAQYLGKKKTWTRKIVLLTDGESPMEIEDWEATVRKMNDIGVSLTIV
GIDFDDDDLPFHEEGKSRTKAANEQFYRSFVAELEHGIVGTCALALREITRPDIKETKSA
LTSTMLRLGDVDARPEEALELVVRTSKCTALARPKGWKRFAPVRKRRDGMDVDEDGDRDG
GEEVGEKVAWTQLAARTEYYVGNQKDEDGEDGGDHTDDESAKDGENGDGAKVEKEDLVRG
FKYGATYVPCPEGAFPRLETRKGIDICGFFKAKNFRRELAMGEVYYVWADPAVPAQQIAL
SSIAQAMEEKGVMAIARWVSRDGMDPKMGVLAPSVFEKIDCLLWVQMPFADDVRKYTFAS
LDTLINKNGEVVEEHAYLPTPEQQDAMDAFVDAMDLMEAGEKDEEGNRYPWYDTRLSYNP
AIHRTKQALFHSAVAQDLNSNPLPPPHPELLKYFEPPKKVLKRAAPAIEHAKAAFKVREV
PKRVAKGRQDGHRRARDEDEDVLLLDKFAGPNGRTQSQSQVQQTQELAETERERSQRRPK
RKAADSETESESEEEALLLDAAKPQTESKVGKPVSKRNAAHGRPPPTPPAEDGARMDVDP
GAESQADVDPGLEPGRIVGMTYPLEDFKKNIARGDVVTKAVEDLAAVIMEIVMRPFSGRR
RMEMVDCMRAMRDTCLKEDEIDAWNQFLRNLKDQCISQSPGNREFWSSVAEEGRELSLIS
DKEAKQHGGRSSVSEKEATNFMKA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgaaagggctgggtacacagtcacgatgttcctcgtggacatctcgccgtcc
atgggcaagcttcgcgaggtcgagcttccacccgggcccaagggcgagcgccgcacgacg
gaggttaccaacctcgagtggggactgcagtttgtcaaactcaagattcaagagatgata
ttccacggccgcaagaccgagcaatgcggcgtcatcctcttcggtaccgaagaaacgcac
aacctggtgcacgaccagatgaagagcggatacgagcacgtttcggagtatatccccatt
tcacaaccgaatgcaggaacgctcgctaaactgtctaaactacaaccaagcgaggtctcc
ggggatcctatcgacgccctcatagtgggcctcgaggcgcaggcgcagtacctcgggaag
aagaaaacctggacgcgtaaaattgtcctgctcaccgatggcgagagccctatggagatt
gaggactgggaggccacggtgcgaaagatgaacgacatcggcgtcagcctcaccatcgtt
ggtattgacttcgacgacgatgacctgcccttccacgaggaaggaaagtcacgcaccaag
gccgccaacgagcagttctaccgctctttcgtcgccgagctcgagcacggcatcgtcggt
acctgcgccctcgcgctgcgcgagatcactcgaccggacatcaaggaaaccaagtcggca
ttgacgagcacgatgctgcgcctgggagacgttgacgcgcgtccggaggaagcgctcgag
ctggtggtgcgcacgagcaagtgcacggcgctcgcgcggccgaagggctggaagcggttc
gcccccgtgcgtaaacggcgcgatgggatggatgtagacgaggatggagatcgggacggc
ggggaagaagtgggcgagaaggtggcgtggacacagctcgcggcgcgcacggagtactac
gtcgggaatcagaaggatgaggacggcgaggacggtggggaccacaccgacgacgagagt
gcgaaggacggcgagaacggggacggtgcgaaggtggagaaggaggacctcgtgcgcggg
ttcaagtacggcgcgacgtacgtgccatgccccgaaggcgcgttccccaggctggagaca
cggaagggaatcgacatctgcggcttcttcaaggccaagaactttcgacgcgaactcgcg
atgggcgaggtgtactatgtctgggcggacccggccgttcccgctcagcagatcgcactc
tcgagcatcgctcaggcgatggaagagaagggcgtcatggcgatcgctcgctgggtgagt
cgcgacggcatggaccccaagatgggtgtgctcgcaccgagcgtgtttgaaaagatcgat
tgtctgctctgggtccagatgccttttgcggatgacgtgcggaagtatacgttcgcctca
cttgatacgctgatcaacaagaacggcgaggtggtggaggagcacgcgtatctcccgacg
cccgagcagcaggacgcgatggatgccttcgtcgatgccatggacctgatggaagcgggc
gagaaagatgaagaaggtaatcgctatccatggtacgacacccgcctatcgtataacccc
gcgatccaccgcacgaagcaagcgctcttccactccgctgtcgcgcaagacctgaattcc
aatccgcttccgccgccccatcctgagttgttgaagtatttcgagccgccgaagaaggtg
ctcaagcgcgccgcgccggcgatcgagcacgccaaggccgccttcaaagttcgcgaggtt
ccgaagagggttgcgaagggccggcaagatggacaccgacgcgcgcgggatgaggacgag
gacgtgctcctccttgacaagttcgcgggcccgaacgggcgcacgcagtcgcagtcgcag
gttcagcagacgcaggaactcgcggaaacggagcgggagcggtcgcagcggcggccgaag
cgcaaggcggcggacagcgagacggagtccgagtcggaagaggaggcgctcctgctggac
gcggcgaagccgcagacggagtcgaaggtcgggaaacccgtgtcgaagcggaacgcggcg
catggacgcccgcctcctacgccgcccgcggaagacggggcgcggatggacgtcgacccc
ggcgcggagtcgcaagcggacgtcgaccctgggctcgagccgggtcgcatcgtcggcatg
acgtacccgctggaggacttcaagaagaatattgcgcgcggggacgtggtgacgaaggct
gtcgaggatctcgcggcggtgattatggagatcgtgatgcggccgttctcgggcaggagg
cggatggagatggtggattgcatgcgcgctatgagggatacgtgtttgaaggaggatgaa
atcgacgcatggaaccagttccttaggaatctcaaggaccagtgcatatcgcagtcgcca
ggaaaccgcgagttctggagtagcgtggcagaggaaggtcgagaactcagcttaatcagc
gacaaggaggcgaaacagcatggcgggcgatcgtcggtatctgaaaaggaggcaacgaat
ttcatgaaagcgtga
DBGET
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