KEGG   Punctularia strigosozonata: PUNSTDRAFT_79078
Entry
PUNSTDRAFT_79078  CDS       T03131                                 
Name
(RefSeq) Sm-like ribonucleo protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
psq  Punctularia strigosozonata
Pathway
psq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PUNSTDRAFT_79078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psq03041]
    PUNSTDRAFT_79078
   03032 DNA replication proteins [BR:psq03032]
    PUNSTDRAFT_79078
Spliceosome [BR:psq03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PUNSTDRAFT_79078
  U2 snRNP components
    PUNSTDRAFT_79078
 Complex B
  U1 snRNP components
    PUNSTDRAFT_79078
  U4/U6.U5 tri-snRNP components
    PUNSTDRAFT_79078
 Complex C
  U2 snRNP components
    PUNSTDRAFT_79078
DNA replication proteins [BR:psq03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PUNSTDRAFT_79078
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 18885860
NCBI-ProteinID: XP_007378418
JGI: 79078
LinkDB
Position
Unknown
AA seq 111 aa
MSQYVHVPKSELDEAQLRALEEHEISQGPLSVLQQAVRNHAQVLISLRNNKKLLARVKAF
DRHSNMVLENVKEMWTEVPKGKNKKPVNKDRFISKMFLRGDSVILVLRHQV
NT seq 336 nt   +upstreamnt  +downstreamnt
atgagtcaatacgtgcacgttcccaagtccgagctggacgaggcgcagcttcgtgctctg
gaagagcatgagatcagtcagggcccgctgtcggtgttgcagcaggcggtgaggaaccac
gcccaggtcctcatctcgctccgcaacaacaagaagctgctagcgcgcgtcaaggctttc
gacaggcacagtaacatggttctggagaacgtgaaagagatgtggaccgaggtcccgaaa
ggaaagaacaagaagcccgtcaacaaggaccggttcatcagcaaaatgttcctgcgtggc
gactccgtaattcttgtcctccgccatcaggtataa

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