Punctularia strigosozonata: PUNSTDRAFT_79235
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Entry
PUNSTDRAFT_79235 CDS
T03131
Name
(RefSeq) DEAD-domain-containing protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psq03041
]
PUNSTDRAFT_79235
03009 Ribosome biogenesis [BR:
psq03009
]
PUNSTDRAFT_79235
Enzymes [BR:
psq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PUNSTDRAFT_79235
Spliceosome [BR:
psq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PUNSTDRAFT_79235
Ribosome biogenesis [BR:
psq03009
]
Eukaryotic type
90S particles
Helicases
PUNSTDRAFT_79235
Pre-60S particles
PUNSTDRAFT_79235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
18885870
NCBI-ProteinID:
XP_007378508
JGI:
79235
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MSGDTPAPAPQPIASTSSDPSSSRKPFSELDLSENTQNALKEMGFTHMTPIQEKSIPPLL
TGKDVLGAARTGSGKTLAFLIPAIELLHRMKFKPRNGTGVIIVSPTRELALQIFGVAKEL
MAHHPQTFGIVMGGANRKAEVDKLQKGVNLLVATPGRLWDHLENTKGFVFRNLKCLVIDE
ADRILEVGFEEEMKKIINMIPNENRQSMLFSATQTTKVQDLARISLRPGPLLIDVDHQEA
TSTVSTLSQGYVVCPSDRRFLLLFTFLKKNLKKKVIVFFSSCNSVKYHAELLNYIDVPVL
DLHGKQKQQKRTNTFFEFMNAPAGILLCTDVAARGLDIPKVDWIVQYDPPDDPRDYIHRV
GRTARAGKVGKSLLFLLPSELGFLRYLKEAKVPLNEFTFPKERIANVQNQLEKLLTKNYF
LHQSAKDGYRSYLQAYASYSLKKIFDVNQLDLVKVGKSFGFAVPPRVNLNIAGSGTPGTG
QSKGNNKRKRDTGAGSDEEVEGEWLDMNAGRHGEGNEEADGDEAINSEEVSRKERRGPDF
RQKQRRIEALGKKRVDKEFYKKQHAKKGGGGAQWTR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgatactccggcacccgcacctcagccaattgcatctacctcctcagatccg
tcttcatcccgcaaaccgttctctgagctcgacttgtccgaaaacacacaaaatgctctc
aaggagatggggttcacgcatatgactcctatccaggaaaagtctatcccaccgttactc
acgggaaaggatgtacttggtgctgcgaggacgggcagtgggaagacgttggccttcttg
atcccggcaattgagctgctgcataggatgaagttcaagcctcgtaacggcacaggcgtt
atcatcgtgtcccctactcgagaattggctctgcaaatcttcggcgtcgcgaaggagctc
atggcgcaccatccgcagacgttcggcatcgttatgggaggtgcaaaccgcaaagcggag
gtggacaagttgcagaaaggtgttaatctgctggtagctactcctggacgattatgggat
catcttgagaacacgaaaggattcgtctttagaaatcttaagtgtcttgtgattgacgag
gcagatcggatattggaggttggtttcgaggaggagatgaagaagatcatcaacatgatc
ccgaatgagaaccggcagtcaatgctattctctgcaacgcagaccacgaaagttcaggat
ttggcacgaatatcgctacggcctggtccgctcctcatagacgtggatcaccaagaggcg
acgtcgaccgtctcgacgctctcacagggttacgttgtttgcccttcggatcgacggttc
ctcctcctcttcacgttcctcaagaagaacctgaagaagaaagtcatcgtcttcttctca
agctgtaacagcgtgaagtaccatgccgagttactcaactatatcgacgtccccgtgctt
gacttgcatggaaagcaaaagcaacaaaagcgtaccaacacattcttcgagttcatgaac
gcgccggctggcatcttactttgcacggacgttgccgcgcgtggtctcgatatcccgaag
gtcgactggatcgtgcagtatgatcctcctgacgaccctcgcgactatatccaccgagtg
ggtcggacggctcgtgcggggaaggtcgggaaaagtttgctattcctgctgcctagcgag
ctagggtttttgcggtatttgaaggaggcgaaggtcccgctgaacgagttcactttcccc
aaggagagaattgcgaacgttcagaaccagcttgagaaactcctgacgaagaattatttt
ctccaccaatccgcgaaggacggttaccgctcttatcttcaggcatatgcttcttattcg
ttaaagaagatatttgacgtcaaccaactggacttggtcaaagtcgggaaatctttcggc
ttcgccgtgccgccacgagttaatctcaacattgccggctccgggacacctggtaccggg
cagagtaagggtaacaacaagaggaaacgggacacgggtgccggctcggatgaagaagtg
gaaggcgaatggttggatatgaatgcgggaaggcacggggagggcaacgaggaggcggac
ggcgacgaagcgattaactcggaggaggtgtcgaggaaagagaggagaggtccggatttt
aggcaaaagcagaggaggatcgaagcgctcgggaagaagagggtggacaaggaattttac
aaaaagcagcatgcgaagaaaggcggtggaggtgcgcagtggactcgatga
DBGET
integrated database retrieval system
