Punctularia strigosozonata: PUNSTDRAFT_79371
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Entry
PUNSTDRAFT_79371 CDS
T03131
Name
(RefSeq) polyubiquitin-tagged protein recognition complex Npl4 component
KO
K14015
nuclear protein localization protein 4
Organism
psq
Punctularia strigosozonata
Pathway
psq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PUNSTDRAFT_79371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psq03009
]
PUNSTDRAFT_79371
Ribosome biogenesis [BR:
psq03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
PUNSTDRAFT_79371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
18885876
NCBI-ProteinID:
XP_007378580
JGI:
79371
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MLLRIRSRDGNFRFELQPTSDISELIAKISDTAPDADQSTLTISNQPRGNEISMSSLKGR
NLQSLGFKHGDLLFVGYQPRAAPSNVVNEQAPSRSGPSTSTVSAKRPFETVEEDAVDHYW
RSQDGMIPRGRDSRFCKHGANAMCDYCMPLEPYDAEYQQKNNIKHLSYHAYLKKLAPKTS
STAAASLPPLSQPSYKVQVPCPTGHASWPAALCSTCQPSAITLQSQEFRMVDHLEIASTD
VINRFLQAWRVTGLQRFGWLIGHYEPYDKVPMGIKAVVEAIHEPPQEGELDGLTLGLPWE
DEPRIRHLAKSASTPLSIVGYIFTDITPSPDDVTKNLFKRHPQSFFLSSLEAIFAAHVQN
ANPTPTRSSPTGKFASRLVTAVLTGTEDGGIDISAYQVSEQACAMVDADMIEASVEPGIV
RVKEEDRSTDVARYVPDVFFRYKNEYGIEVKRSAKPCFPVEYLLVTLSHGFPQNPSPVFK
STNFHIENRPGLEDQTIEKVMHELARLGAPDIEESRFGGDHSKRLALAQYLSDWHLLAFL
GTTQLISEEDMGTLIRTLTSSDFESPTLLDPIISSTSWQTLMTFTRESVPAPRPSGQTTG
GPAPPSAMDEDIPQEILDQIAAADAAASGGSSGASIRICPHCTFENSHSGSDCEVCGLPL
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcttctacgaatacgatcccgggatggaaacttccgatttgagctccagccgacctca
gatatctcagagctaattgccaaaatatcagataccgctccagatgcagatcagtcgaca
cttaccatatcgaaccaacctaggggcaatgaaatctccatgtccagcctcaagggtcgc
aacttgcaaagtttaggtttcaaacacggagatcttctctttgtaggatatcaaccacgc
gccgctcctagcaatgttgtcaacgaacaagccccatcaagatcgggtccctctacgagc
actgtctctgcaaaacgaccgtttgaaaccgtcgaagaagatgccgttgatcactattgg
cgatctcaggacggcatgataccacgagggcgtgattctcggttctgcaaacacggcgcg
aatgccatgtgcgattattgcatgcccttggaaccctacgacgccgaatatcagcagaag
aacaacatcaagcatctctcctaccatgcatacctcaagaagttagctccgaagacgagt
tcgacagctgcagcttcgttgcctcctctcagtcaaccttcgtacaaggtacaggtgccc
tgtcctaccggtcatgcctcctggcccgcagccctatgtagcacgtgccagccatcagcc
atcacactgcagtcacaagagtttcgcatggtggatcacctcgaaattgcgtctacagac
gtgatcaaccggttcctgcaggcatggcgcgtgactggactgcagcgcttcgggtggttg
atcggccattacgagccgtacgacaaggtaccaatgggcatcaaagccgttgttgaagcc
atccacgagccaccacaggaaggggagcttgacggtctgacgcttgggctcccgtgggag
gacgaaccgaggattagacatctcgctaaatcagcttccactccgctgagcatcgtcggc
tatattttcaccgacatcacaccttctcccgacgacgtgacgaagaaccttttcaagcgc
catccacagtcattcttcctgtcgtctttggaggccattttcgcggcgcatgtccagaac
gccaacccgacgcccactaggtcctcacccacgggtaaattcgcttcgcgactggtgacc
gcggtcttgacagggacggaggatggtggcatcgacatttcggcatatcaggtctctgag
caggcgtgtgcgatggttgacgcggacatgatcgaagccagcgtcgaaccgggtatcgta
cgggtaaaggaagaggaccggagtacggatgttgcgcgatacgtcccagatgttttcttc
cgttacaagaacgagtacggcatcgaagtcaagaggagcgccaagccatgttttcctgtc
gaatatttgcttgtgacgctatctcacggcttccctcaaaacccgtcgcctgtcttcaag
tcgaccaatttccacatagaaaacagacctggattagaggatcagaccatcgagaaggtg
atgcacgagctcgcaagactgggagcaccagacatcgaggagagccgctttgggggtgat
cactcgaagcggctggctctcgctcagtaccttagcgactggcatcttctagcattcctc
ggcacgacacagcttatatccgaagaggatatggggacgctcatccggacgctgacttca
tcggacttcgagagtcctacgctcttggacccaatcatatcctcgacaagttggcaaacg
ttgatgaccttcacgagggagtcagttcctgctcctcgacccagcggtcagacgacgggg
ggcccggcacctccaagtgctatggacgaggatatcccccaggaaattttggaccaaatc
gcggccgcagacgctgcagcctctggaggatcgagtggggcgagtatacgcatttgccct
cactgtacgttcgagaacagccacagtgggtcggattgtgaggtttgcggactgcctctt
ggttga
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