Punctularia strigosozonata: PUNSTDRAFT_81827
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Entry
PUNSTDRAFT_81827 CDS
T03131
Name
(RefSeq) pre-mRNA-processing-splicing factor
KO
K12856
pre-mRNA-processing factor 8
Organism
psq
Punctularia strigosozonata
Pathway
psq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PUNSTDRAFT_81827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psq03041
]
PUNSTDRAFT_81827
Spliceosome [BR:
psq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PUNSTDRAFT_81827
Complex C
U5 SnRNP specific factors
PUNSTDRAFT_81827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Corona_5a
Motif
Other DBs
NCBI-GeneID:
18886003
NCBI-ProteinID:
XP_007380115
JGI:
81827
LinkDB
All DBs
Position
Unknown
AA seq
2350 aa
AA seq
DB search
MAGMPPPPPGAPSGMLPPPPGAPSGSKMPPEVLKQKSQKWIQMQNRRYGEKRKGGYVDIG
KQDLPPEHVRKIIKDHGDMSNRKFRNDKRVHLGALKYVPHAVMKLLENLPFPWEQVREVP
VLYHITGAITFVNDIPRVIEPVYHAQWATMWLAMRREKRDRRHFKRMRFPPFDDEEPPLD
YGDNVLDVEPLEAIQLELDPEEDAAVIDWFYDAKPLIDTPAVNGPSYRYWSLDLPVMANL
YRFGRTLLSDRTDINSSYLFDKKSFFTAKALNMAIPGGPKFEPLYRDLDTFDEDWNEFND
IGKVIIRQQIRTEYRVAFPHLYNSLPRSVQLSPYHAPKNVYIRTDDPDLPAFYFDPLINP
ISLRGLNKGAPLVPHEDVIFGPNGADDDDFELPEEVAPFLEDKELENDLTADAIALWWAP
EPYCRRSGRMRRAQDIPLVKNWYLEHCPPNQPVKVRVSYQKLLKVFVLNELHTRPEKAMT
KKNLFRQLKATKFFQTTRLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNLNLKPVK
TLTTKERKKSRFGNAFHLCREILRLTKLVVDANVQYRLGNVDAFQLADALQYIFAHIGAL
TGMYRYKYKLMRQVRMTKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGIVPLL
ERWLGNLLARQFEGRNSKGVAKTVTKQRVESHYDLELRAAVMHDILDMMPESIKQNKAKT
ILQHLSEAWRCWKANIPWKVPGMPTAIENIILRYIKSKADWWTSVAHYNRERIRRGATVD
KAVVKKNLGRLTRLYLKAEQERQHAYLKDGPYISAEEAVAIYTATVHWLESRKFAPIPFP
PLSYKHDTKLLVLALEKLKEAYSVKGRLNQSQREELALIEQAYDNPHECLSRIKRLLLTQ
RAFKEAGIEFFDTYDKLIPCYDIEPVEKITDAYLDQFLFFEADKRGLFPAWIKPADTEPP
PLLVYKWCQGINNLTDIWETNEGECVVMMETVLSKVYEKIDLTLLNRLLRLILDHNLADY
ITAKNNTVLTYKDMAHTNAYGLIRGLQFSAFVFQYYGLVLDILILGLQRASEMAGPPQMP
NNFLQYRDSATETRHPIRLYSRYVDRLHILFRFSAEESRDLIQRYLSANPDPTNNNVIGY
NNKRCWPRDCRMRLIKHDVNLGRAVFWNVKNSLPRSLTTIEWEDTFVSVYSKDNPQLLFS
MCGFEIRILPKIRTMGGEQYSLKDAVWNLTNEQTKERTAQAFLRVSDEGVQQFNNRIRQV
LMSSGSTTFSKIVNKWNTALIGLMTYYREAVIHTNELLDALVKAENKIQTRVKIGLNSKM
PSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGVTHFRAGMSHEEDQLIPN
LYRYLQPWEAEFLDSARVWSEYSMKRKEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDR
HTLAYDRGWRVRTDWKQYQLLKHNPFWWTSQRHDGKLWQLNNYRVDVIAALGGVETILEH
TLFKGTYFPTWEGLFWEKASGFEESMRYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANV
YVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELEPLQIE
TVQKETIHPRKSYKMNSSCADILLFSAYKWNITRPSLVADGKDVLDGTTSNKYWIDVQLR
WGDFDSHDIDRYTRAKFLDYVSDSMSIYPSPTGVMIGMDLAYNLWSAYGNWFPGMKPLIQ
QAMAKIVKANPALHVLRERIRKGLQLYSSEPTEPYLNSQNYSELFSNQIIWFVDDTNVYR
VTIHKTFEGNLTTKPINGAIFIFNPRSGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAA
LVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACMKMEKFGDLIL
RATQPQMVLFSLYDDWLKSISSYTAFSRLILLLRGLHVNNEKAKIILHPDKNTITEPHFV
WPSLSDEEWIKVEVAMKDLILADFGKRNSVNIASLTASEIRDIILGQEIAAPSVQRQQMA
ELEKSSEAQGQVTAVQTQTTNVHGDTIQTVTTTNYEQQVFSSKSDWRVRAISATHLPLRL
QHIYVSNDDVKDDASAFTYVLPKNILRAFVTAADLRTQVAAFLYGVSPPDNKQVKEIKAV
AWAPQRGNNNTVELPSRLPKDDYLLKDLEPLGWIKTQALELPHLSPTDVTTQAKIMADHP
EWGPSSICLTVSFTPGSVSLSAHSLTVAGFEWGRKNNDNSVNPPGFNPNMSERVQLLLSD
RILGMTLVPEGKVWNYGIGLTNIWSPNMPYSMTLDTPLLFWAEEHRPAAFLSFANLETGD
DSADVENALA
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atggctggaatgccacctccgcctccgggcgcaccgtctggcatgctgccgccgccacct
ggcgcgccgagtggttcgaaaatgccgccggaggtcctcaagcaaaagtcgcagaagtgg
atccagatgcagaacaggcgctacggggagaagcgcaagggcggatacgtggacataggg
aagcaggatttgccgcccgagcacgttcgcaagatcatcaaggatcacggcgacatgagc
aaccgcaagttcaggaacgacaagcgggtgcatctcggcgcgctcaagtacgtgcctcac
gccgttatgaagctgttggagaacctacccttcccctgggagcaagtgcgcgaggtcccg
gtcctctaccacatcacgggcgccatcacgttcgtcaacgacatcccgcgggtcatcgag
cccgtctaccatgcgcagtgggcgaccatgtggctcgccatgcgtcgcgagaagcgcgat
cgacggcacttcaagcgcatgcgtttcccgccgttcgacgacgaagaaccacctctcgac
tacggcgacaacgttttggacgtggaaccgctagaagccatccagctcgagctcgacccg
gaagaagacgccgccgtcattgattggttttacgacgcgaagcctctcatcgacaccccg
gcggtcaacggcccatcgtacaggtactggtcgctcgacctgcccgtcatggccaacctc
taccgcttcggccggaccctcctctccgaccgcaccgacatcaactcgtcatacctcttc
gacaagaagtcgttctttaccgccaaggcgctcaacatggccatcccgggcgggcccaag
ttcgagccgctttaccgcgacctggacacgttcgacgaggactggaacgagttcaacgac
atcggcaaggtcatcatccgccagcagatccgcaccgagtaccgcgtcgcgttcccgcac
ctgtacaactcgctcccgcgctccgtccagctctccccttaccacgcgccgaagaacgtc
tacatccgcacggacgaccccgacctgcccgcgttctacttcgaccctctcatcaatccc
atctccctccgcggcctaaacaagggcgcgccgctcgtcccgcacgaggacgtcatcttc
gggccgaacggcgccgacgacgacgactttgagctgccggaggaggtcgcgccgttcttg
gaggataaggagctcgagaacgacctcacggccgacgccatcgcgctgtggtgggcgccc
gagccgtactgccggcgctcggggcgcatgcgccgtgcgcaagatataccgctcgtcaag
aactggtacctcgagcactgcccgccgaaccagccggtgaaggttcgcgtttcgtatcag
aagctgctgaaggtcttcgttcttaatgagttgcacacgaggccggagaaggccatgacg
aagaagaacttgttcaggcagttgaaggcgaccaaatttttccaaacgacgaggcttgat
tgggtagaggccggcttgcaggtttgcaggcagggatacaacatgctgaacctgcttatt
caccgcaagaacctgaactacctacatttggattacaacttgaacctgaagccggtcaag
acgctcacgaccaaggagcgtaagaagtcgcggttcggaaacgcgttccacttgtgccgt
gagatcctacgcctcaccaagctcgtcgtcgacgccaacgttcaataccgcctcggcaac
gtcgacgccttccagctcgccgacgcgctgcaatacatattcgcgcatatcggcgcgctc
accggcatgtaccgttacaagtacaagctgatgcggcaggtgcgcatgacgaaggacctc
aagcacctgatctactatcgcttcaacaccgggcccgtcggcaaaggtcccggctgcggc
ttctgggcgcccggctggcgcgtttggctcttcttcatgcgcggcatcgtgccgctgctc
gagcgctggctcgggaacctgctcgcccgccagttcgagggccgcaacagcaagggcgtc
gcgaagacggtgacgaagcagcgcgtcgagtcgcactacgatctcgagctccgcgcggcg
gtcatgcacgacatcctcgacatgatgcccgagtcgatcaagcagaacaaggcgaagacg
atcctgcagcacctgtccgaggcgtggcggtgctggaaggcgaacatcccgtggaaggtg
cccggcatgccgacggcgatcgagaacatcatcctccggtatatcaagagcaaggcggac
tggtggacgtcggtcgcgcactataaccgtgagcggatacggcgtggagcgacggtcgac
aaggcggtcgtgaagaagaacctcggtcgtctcacccggctgtacctcaaggccgagcag
gagcgccagcacgcgtacctcaaggacggcccgtacatcagcgccgaggaggccgtggct
atctatacggccacggtgcattggctggagagccgcaagtttgcacccatcccgttccct
ccgctctcgtacaagcatgataccaagctgctcgtgcttgcgctcgagaagctgaaggag
gcgtactccgtcaagggccgcctgaaccagtcgcagcgagaggagctcgcgctcatcgag
caggcgtacgacaacccgcacgagtgcctgtcgcgtatcaagcggctgctcctcacccag
cgcgcgttcaaggaggccggcatcgagttcttcgacacgtacgacaagcttatcccgtgt
tacgacatcgagcccgtcgagaagatcacggacgcgtatctggaccagttcctgttcttc
gaggcggacaagcgcggtctgttccccgcgtggatcaagccggccgacacggagccgccg
ccgctgttggtgtacaagtggtgtcagggcatcaacaacctcacggatatttgggagacg
aacgaaggcgagtgcgtcgtcatgatggagaccgtgctgtcgaaggtatatgagaagatc
gatttgacgctgctcaaccgtcttctccgtctcatcctcgaccataacttggcggattac
attacggcgaagaacaacacggtcctgacctacaaagatatggctcatacgaacgcgtac
ggtctcatccgtggtctccagttctcggccttcgtcttccagtactatggtctcgtgctc
gatatcctcatactcggcttgcaacgggctagcgagatggcgggacctccgcagatgcct
aacaacttcttgcagtaccgcgactcggcgacggagacccggcatccgatccgtttgtac
tcgcgttacgtcgaccgcctccacatcctcttccgcttcagtgcggaggagtcgcgagac
ctcatccagcggtacctcagcgcgaacccggacccgaccaacaacaatgttatcggctac
aacaacaagcgttgctggccgcgcgactgccgtatgaggctgatcaagcacgacgtcaac
ctcgggcgggcggtgttctggaacgtgaagaactcgttgccgcgatcgttgacgactatc
gagtgggaggacacgttcgtcagcgtctactccaaggataacccacagctcctcttctcg
atgtgcggcttcgagattcgcatcctgccgaagatcaggaccatgggtggcgagcagtac
tcgctcaaggatgcggtgtggaacctcacgaacgagcagaccaaggagcgtacggcgcag
gccttcttgcgggtctcggacgaaggtgttcagcaattcaacaaccgtattcgtcaagtc
cttatgagctccggctcgacgaccttctcgaagatcgtgaacaagtggaacacggcgctc
atcggtctgatgacctactaccgcgaggccgtcatccacaccaacgagctgctcgatgct
ctcgttaaggccgagaacaagatccagacgcgagtgaagatcggcctcaacagtaagatg
ccgtcgcgtttcccgcccgtcgtcttctacacgccgaaggaactcggtggtcttggtatg
ctttccatgggccacgtgctcatcccccagagcgatctgcggtggtcgaagcagaccgac
gtcggcgttacccacttccgggccggcatgtcgcacgaggaggaccaacttatcccgaac
ttgtaccgttacctccagccgtgggaggccgaattcctcgactctgcccgcgtatggtcc
gagtactcgatgaagcggaaggaggcgaacgcgcagaaccgccggctgacgctggaagat
ctggaggacagctgggatcgcggtattcctcgcatcaacaccctgttccagaaggatcgg
catacgctcgcatacgaccgtggttggcgggtacggacggactggaagcagtaccagctc
ctgaagcacaatccgttctggtggacgtctcagcgccacgacggcaagctttggcagttg
aacaactaccgcgtcgatgtcatcgctgcgcttggcggtgtcgaaaccatcctcgagcac
accttgttcaagggtacctacttccccacatgggagggtctcttctgggagaaggcgtcc
ggtttcgaagaatccatgcgatacaagaagttgacgaacgctcagcggtccggtctgaat
cagatccctaaccgtcggttcacgctctggtggagtccgactatcaaccgagcgaatgta
tacgtcggtttccaagtgcagctcgacttgacgggcatcttcatgcacggcaagatcccg
accctgaagatctcgctcatccagatcttccgtgctcacttgtggcagaaaatccacgag
agtgtcgtcatggacttgtgtcaagtcttcgaccaggagctcgagcctttgcaaatcgag
accgtgcaaaaggagaccattcaccctcgtaagagttacaagatgaactcatcctgcgcg
gatatcctgctgttctctgcatacaagtggaacattactcgtccgtcactcgtggccgat
ggcaaggacgtcctcgacggtacgacgtccaacaagtactggatcgatgtgcagctgcgt
tggggcgatttcgactcgcacgatatcgaccgatacactcgcgccaagttcttggactac
gtctcggactcgatgagtatctatccgtcccctaccggtgtcatgatcggcatggatttg
gcctacaacctgtggtcggcgtacggtaactggttccctggcatgaagcccctcattcag
caggctatggcgaagatcgtcaaagccaatccggctctgcacgtccttcgagaacgtatt
cggaagggtctccagctttactcttccgagccgacggagccgtacctcaacagtcagaac
tattccgagctgttctcgaaccagatcatctggttcgttgacgatacgaacgtttaccgt
gtcacgatccacaagaccttcgagggtaacttgacgacgaagcctatcaacggcgccatc
ttcatcttcaacccccgctccggccagttgttcttgaagatcattcacaccagcgtgtgg
gctggccagaagcgtctcgggcagcttgcgaagtggaagaccgccgaagaagtcgcggcg
ttagttcgttcgttaccggtcgaagaacagccgaagcaagtcatcgtcacccggaagggc
atgttggacccgctcgaagtccacttgctcgacttcccgaacatcgtcatcaagggtagc
gagctgcaactgccattccaggcctgcatgaagatggagaagttcggtgatctcatcctt
cgtgccactcaaccccagatggtcctcttcagtctgtatgatgactggctcaagtccatt
tcgagctacaccgcgttctcgcgcctcatcctcttgctccgtggtctgcacgttaacaac
gagaaggcgaagatcatcctccaccctgacaagaacaccatcaccgagccacacttcgtt
tggccgtcattgtcggacgaggagtggatcaaggttgaggtcgccatgaaggacctgatt
cttgcggacttcggcaagcgtaatagcgtgaacatcgcctcgctcaccgcaagtgagatc
agggacatcatccttggtcaggagattgccgctccgtccgtgcagaggcagcagatggcg
gagctcgagaagagctcggaggcacaaggtcaggttacggctgtgcaaacgcagacgacc
aacgtccacggtgataccatccagaccgtcactaccacgaattatgagcagcaggtcttc
agcagcaagtccgactggcgtgttcgtgccatctccgccacgcacctgccactcaggctg
caacatatctacgtctccaacgacgacgtcaaggacgatgcgagcgcctttacctacgtt
ctgccgaaaaacatcctccgtgccttcgtcacagcggccgacctccgcactcaggtcgcc
gcgtttttgtacggtgtatcgccgccggataacaagcaagtcaaggagatcaaggccgtc
gcttgggcacctcagcgcggcaacaacaacacggttgagctcccttcgcgcctgccgaag
gacgactatctgctgaaggacctcgagccccttggctggatcaagacgcaggcgttggag
ctgccgcatctctcgccaacggacgtcaccacacaggcgaagatcatggccgaccaccca
gagtggggtccgtcgtcgatctgtctgacggtgtcgttcacacccggttcggtgtctttg
tccgcgcattcgttgaccgtcgccggcttcgagtggggtcgcaagaacaatgataactcg
gtgaacccgccgggcttcaaccccaacatgtcggaacgcgtgcagctcctgctctctgac
cgtattctcggtatgactcttgtcccggagggcaaggtgtggaattatggcatcgggttg
accaacatctggtcaccaaacatgccttactctatgactctggacaccccgttactcttc
tgggcggaggagcatcggccggccgcattcttgagcttcgccaacctcgaaaccggagac
gacagcgctgacgtcgaaaacgccctggcttga
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