Punctularia strigosozonata: PUNSTDRAFT_85510
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Entry
PUNSTDRAFT_85510 CDS
T03131
Name
(RefSeq) vacuolar protein sorting-associated protein 41
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
psq
Punctularia strigosozonata
Pathway
psq04138
Autophagy - yeast
psq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PUNSTDRAFT_85510
04148 Efferocytosis
PUNSTDRAFT_85510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psq04131
]
PUNSTDRAFT_85510
Membrane trafficking [BR:
psq04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
PUNSTDRAFT_85510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_CDC20-Fz
WDR55
WD40
Beta-prop_EML_2
WD40_Prp19
zf-RING_Vps41
Vps39_1
zf-RING_16
zf-RING_2
EIF3I
zf-RING_UBOX
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
18886185
NCBI-ProteinID:
XP_007382527
JGI:
85510
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSSKSFRPAAPSDVLLSAIIPTYGPFQGPKCRRNILTLNRINGGPTPGGDQTRVTQHPSD
DEDLDEHSEDDDAEYEEDDEDEYEDEEPALKYERLGGPIHDLLQRDSASALAIANKLLAL
GTHAGIVHILDLAGKRIKSFKPHGASVCDITMDSAAEFVATASMDGQIVIHTLNPASTES
YVFDMKRPMRTVSLEPDFHKRSTRAFVCGGMAGALVLHEKGWLGHKETTLSSGEGPVWVA
RWKGRLIAWANDLGVKVYDTTSQTRITYIDRPSDSPRADLFKCTLHWQDDSTLLIAWADQ
IKVARVRARPRNATAPNPAGHAPLIIEITAVFQMDCMIAGIVPHPTPSPSNLAPPPMGKL
PTPSLTSFLLLAYTPPDSSFHDEVTANQARRAAERPELRIVSRAGEELAADALSVSGYER
WGCNDYILAEVDDADSQGRCYIVVSPKDAVVVKPRDRRDHIAWLVERRRYEEALEEVQKL
GDADAVDDGVNVVQIGQRYIEHLVSEGDFGKAAHLCPKVCGQDSKRWEDWIFVFAQKHEL
QAIIPYVPTESPKLSHLVYEMILGHFLAHDRDALLQTIKKWPRTIYDISAIIVAVHAVLD
RTLTSSPTGTQRPLKGESALLMECLAEMYTANRQPGKALPYFLRLRRPNVFDLIREHNLF
TSVQDQALLLMEFDAELMEKRRIAGEIEDATPKTSVELLVDNTHSIPVARVVQQLQNQPY
FLFLYLDSLFAKDPHLASDFADTQVKLCAEHAPSRLIDFLRASNYYSLEQAYRICQEKDL
VPEMVFLLGRMGNNRQALTLIIERLGDVRRAIDFAKEQNDDDLWEDLLRYSETRPPFIRG
LLENVGPEIDPIRLIRRIRNGLEIPGLKGALIKILQDFNLQISLLEGCQTIMHGDCSDLS
RTLHKDQTSGFLLSAQTRCPICREPIVRMPQSLTLLFLCRHVVHAGCVHGLEDLPQDPES
TLIGISGRTISSKLAFAAVVHANINRGCPVCHKLAEGERT
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaaaatcattccggcctgcggcgccctcagacgtgcttttgtcggcaattatt
ccgacgtacggcccttttcagggcccaaaatgtcgtcggaatattctaacattaaaccgt
attaacgggggtcctacgccaggcggggaccagacccgtgtcactcagcacccatcggac
gatgaggatttggacgaacacagcgaggacgacgacgcggagtacgaggaagatgacgaa
gatgagtatgaagatgaggagcctgctctaaaatatgagcgcctcggtggtcccatacat
gacctcctccaaagagattccgcgtctgcacttgcaatagcaaacaagctgctcgctctg
ggcacgcatgccggaatcgtgcatatcctagacttggcgggcaagcggatcaaatcgttc
aaaccgcatggcgcatcggtatgcgatataactatggatagtgctgcagagtttgttgca
acggcgtccatggatggacagatcgtcatccatacccttaaccccgcctccaccgaatcc
tatgttttcgacatgaaacgtcctatgcgaactgtttcacttgaaccggactttcacaaa
cgaagcacacgcgcattcgtttgtgggggcatggcgggtgcgcttgttctgcacgaaaag
ggttggcttggacacaaggagaccacgctcagctccggagaaggtcctgtatgggtagcg
cgttggaaaggcagactaatcgcatgggcaaatgatctaggggtcaaggtctacgacaca
accagtcaaacgcggatcacatacatagaccgaccttcagacagtccccgcgcggatctc
ttcaagtgcacgttgcactggcaggacgattccacgctccttattgcctgggcggatcag
atcaaagtggctagagtccgcgcgcgaccgcgcaatgcaaccgctcccaaccctgcgggt
catgcaccgttgatcatcgaaatcacggcagtattccaaatggattgtatgatcgccggc
atcgtccctcatcccacaccttctcccagcaatctcgctcctcctcccatgggcaagcta
ccaactccatcgctcacgtctttcttgttactggcatataccccccctgattcatccttc
cacgacgaagtgaccgcaaatcaagcaaggagagcagccgagaggccggaacttcgtatt
gtctctcgtgcaggagaagaactggccgcagatgctctgtccgtgagcggctacgaacga
tggggatgtaatgactatatcctcgccgaagtcgatgacgcggacagtcagggccgatgt
tacatagttgttagtccgaaggatgccgtggttgtgaagccaagggatcgcagggatcat
atcgcttggctggtggaaaggcgaagatacgaagaggcgttggaggaggttcagaaacta
ggcgatgcggatgcagtcgacgacggcgtcaacgtcgtacaaattggccaacgctacatc
gagcatctggtttctgaaggcgacttcggcaaagcggcccatttgtgccccaaggtctgc
ggccaagatagcaaacgatgggaagactggatatttgtcttcgctcagaagcatgagctt
caggcgatcatcccgtatgttccgacggagtcaccgaaacttagccatctggtttatgaa
atgatcctggggcatttcttagcccatgaccgagacgcgctattgcagacgatcaagaaa
tggccgagaacaatctacgatatctctgccattattgtcgcagtacacgctgttcttgat
cgaactttgacttcgtcgcctacgggaacacagaggcctctcaaaggagagagcgcgcta
cttatggaatgccttgctgagatgtacaccgccaatcgccaacctggaaaggccctgccg
tacttcctgcgcctgcgccgacccaacgtattcgatcttatccgagagcacaacctcttc
acgtctgtgcaggatcaagctttgcttcttatggaattcgacgcggagttgatggagaag
aggaggattgccggggaaatagaggacgcgacaccgaaaaccagcgtagagctgcttgtg
gacaatacgcactcaatacccgtggctcgagttgtacagcagctgcaaaatcagccttat
ttcttgttcttgtacctcgactccctctttgcgaaggacccacaccttgcgtcagatttt
gcagacacacaggtcaaactgtgtgccgagcatgcaccgtctcgtttgatcgatttcctc
cgcgctagtaactattacagcttggaacaggcatatcgaatttgccaagaaaaggacctt
gtgcctgaaatggtgtttctactgggtcgtatgggaaacaacaggcaggcgctcactctc
ataattgaacgactgggtgatgtacggcgggccatcgattttgcgaaggagcagaacgac
gacgacctttgggaagaccttttgcgatactctgaaacacgacctcctttcattcgtggt
ttgctggagaatgttgggcctgaaattgatcctatcaggcttattcgccgtataaggaac
ggattagaaatccccgggctgaagggtgctctcatcaagattcttcaggatttcaacttg
caaatatcattgctggagggctgccagaccatcatgcacggcgattgctcggacttgtct
aggactctgcacaaggaccaaacgagcggctttttgctatcggcgcaaacgcgatgccct
atttgtcgcgagcctatcgttcgtatgccgcagtctttgacgttactgttcctctgtcga
cacgtcgttcatgcgggctgtgtacatggcctggaggatctaccgcaagacccggaatca
acgctcattggcattagcggacgaacgatcagtagtaaactcgcgttcgcggccgtcgtc
catgcgaacataaatcggggatgtcctgtgtgtcataagcttgccgaaggtgaacgcacg
taa
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integrated database retrieval system
