Punctularia strigosozonata: PUNSTDRAFT_86232
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Entry
PUNSTDRAFT_86232 CDS
T03131
Name
(RefSeq) hypothetical protein
KO
K10881
26 proteasome complex subunit DSS1
Organism
psq
Punctularia strigosozonata
Pathway
psq03050
Proteasome
psq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
PUNSTDRAFT_86232
09124 Replication and repair
03440 Homologous recombination
PUNSTDRAFT_86232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_86232
04131 Membrane trafficking [BR:
psq04131
]
PUNSTDRAFT_86232
03051 Proteasome [BR:
psq03051
]
PUNSTDRAFT_86232
03400 DNA repair and recombination proteins [BR:
psq03400
]
PUNSTDRAFT_86232
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
PUNSTDRAFT_86232
Membrane trafficking [BR:
psq04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
PUNSTDRAFT_86232
Proteasome [BR:
psq03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
PUNSTDRAFT_86232
DNA repair and recombination proteins [BR:
psq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
PUNSTDRAFT_86232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSS1_SEM1
Sep15_SelM
Motif
Other DBs
NCBI-GeneID:
18886225
NCBI-ProteinID:
XP_007383040
JGI:
86232
LinkDB
All DBs
Position
Unknown
AA seq
106 aa
AA seq
DB search
MSSDASTSKAKTDAAALEESNKEQNAPPTLGVLEEDDEFEEFPVQDWDDSETDLKHLGGA
APGAAQSGGNKLWEDNWDDDDIEDEFSMQLRNELAKTGKGGDAMQT
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgacgcatccacatccaaagcaaagacagacgctgccgcgctagaggaatcc
aacaaagaacagaatgccccgcccactctcggcgtattggaagaggacgacgagtttgag
gagttccctgtacaagactgggacgactcggagacagatttgaagcaccttggcggtgcc
gctccaggtgccgcgcagtcgggcggcaacaagctctgggaggacaactgggacgacgac
gacatcgaggacgagttcagcatgcagctacgcaacgaactggcgaaaactgggaagggc
ggagatgcgatgcagacataa
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