Punctularia strigosozonata: PUNSTDRAFT_94537
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Entry
PUNSTDRAFT_94537 CDS
T03131
Name
(RefSeq) AtMMH-1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psq
Punctularia strigosozonata
Pathway
psq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PUNSTDRAFT_94537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psq03400
]
PUNSTDRAFT_94537
Enzymes [BR:
psq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PUNSTDRAFT_94537
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PUNSTDRAFT_94537
DNA repair and recombination proteins [BR:
psq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PUNSTDRAFT_94537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
18886634
NCBI-ProteinID:
XP_007378387
JGI:
94537
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MPELPEVENARRVLEAVGKGKMIQRVDSVKDDIVFCGTTHDEFAKELEGRMITGVQRYGK
LFYMELDGEGRFPVLHFGMTGMIQIQGQEPFHYQSSSRKVSAQWPPNFLKFVLHLGTPDG
EQIAVQVAFCDARRLGRIRLVSSPMTSPPISELGFDPILSMPALSEFSSKVLRRSCPIKA
LLLDQGFSAGVGNWVADEILYHSRIHPEQRCHTLSELQLERLHTHTRQVCRVAVDADADH
TKFPADWLFIHRWGKGKKTGAKSSLKLPSGDPATIKWVTVGGRTSAYVAELQQLPCELDN
IEDNQGESDLTPLSEDELFSVTSTWKPRKSRKRNPEDSTQRTARKR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttccagaagtcgagaatgctcgacgcgtcttggaggccgtcggcaagggc
aagatgatccaaagagtggacagcgtgaaagatgacatcgtattttgtgggactacccat
gatgagtttgccaaggaattggagggacgaatgatcaccggcgtccagcggtacggaaaa
ctgttttacatggagctcgatggcgaaggtcgtttccccgtcttacatttcggcatgaca
ggcatgattcagatacaaggtcaggaaccattccactaccagagctcgtcccgaaaggtc
tccgcgcaatggccacccaatttcttgaagtttgtcctgcatctcggtacgcctgatggt
gaacagatcgctgtccaagtcgccttctgcgacgctcgtaggctgggacgtatccggctc
gtatcctcgccaatgacatctccgcctatctcagagcttggtttcgatcctatactcagc
atgcccgcgttgtccgagttctcttccaaagtgctcaggcgttcttgtccgatcaaggcg
ctcctgctagaccaaggctttagtgcaggcgtaggcaactgggttgcggacgaaattctg
taccattctaggatacatccagaacagcgttgtcatactctcagtgaactccagctcgaa
cggcttcatacgcacacgagacaagtttgccgagtagctgtcgacgcggatgcagaccat
accaaatttccagcagattggctgtttatccatcgttgggggaagggcaagaaaacgggc
gcgaagtcgagtctgaaactaccttctggagatcccgcaaccatcaagtgggtgactgtc
ggagggcgcacttcggcttacgtggcggagctccaacaacttccttgtgaattggataat
atcgaggataatcaaggcgagagcgatctgacaccattgtctgaggatgagctcttttcc
gtcactagtacatggaagccgcgaaagtctcgaaaacgaaatccggaggattcaacacaa
agaacagcacgcaaacgatga
DBGET
integrated database retrieval system
