Punctularia strigosozonata: PUNSTDRAFT_94735
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Entry
PUNSTDRAFT_94735 CDS
T03131
Name
(RefSeq) WD40 repeat-like protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
psq
Punctularia strigosozonata
Pathway
psq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PUNSTDRAFT_94735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psq03009
]
PUNSTDRAFT_94735
Ribosome biogenesis [BR:
psq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PUNSTDRAFT_94735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_2nd
WD40
WDR55
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_Gbeta
BAT
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_RSE1_2nd
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_KIB1-4
DUF7165
Motif
Other DBs
NCBI-GeneID:
18886643
NCBI-ProteinID:
XP_007378500
JGI:
94735
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MGDTSAPTPISVHRCRFVDFQPAAITALSFAPLPLPAPSAKGKEKASAPRWRERYHFGTL
VVGRANGDIELCEWTGDQQVETPQAWVVRKTFPGPRPSKVDSLALALRYPERAKPEDVPT
TSELRLFTAGGGTDVIEWDMSSGSILRTMSSQGGTIWSMAVNPGSTMLALGCEDGAIRIL
SLELGSLQHHRRLDRVKTRILSLAWGPPIVKRNSVNGSDSDDEEEEDEWADEWLVAGGSD
SSLRKWDLASGRVVDRMGTDKIKGERTLVWAVQTLGDGTIISGDSMGMVKFWDSRTCTQL
QSFPAHGADVLCMAISPEGSTVYTSGVDQKIAQFSLVRTASTGSSFLHQPQKWVHTVSRR
LHSHDVRALAIWPPYTLVPPSHRPVYPVGVAPVLVSGGLDMNMVLTPAASAPSTSVAKII
NPLSTSVTATFEDAYHRRLAYSARTVCVARLARLVVSASESGVSIWRVHPQNSTSEEDPA
YLDGFDPEGQRGGWEKILEMELAFTTNIVACGISQDGRWIVVSDHYETKLFALHSTDDGT
LKPKRVRDFAAILVESLPSTSRAAPSTGGTAFVFTPDSLKLVMSTTSAYILIIDLSSERP
RVVRRFEQHRMEHVGIGKAARTKQGGHEAAMDVDGEGSEDDEEEQIPSGDDAVGISVSRM
CVSTDGQWLATTDDRCRTYIFNLDSIQHHSVVPTMPQPIHAMAFNPSASRTTTLIMALAN
NTIQIYDVDAREFPNWARELSASLPKRFTGIHDSVIGVTFDPASASTEGAVALFWGATWI
CKVQLDRPAGWGGFSRKRRRAQKGGANEAGMVIADISQQQQNFKVVTHYRPILALDFFGP
REMVVVERPLVDVLARLPPAYFRPKYGRS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacaagcgcacctacgccaatatctgtgcacagatgccgcttcgtcgacttc
cagcctgctgcaatcacggcgctcagcttcgcaccgcttcctctgcctgcgcccagtgcg
aaaggcaaagagaaggcgtctgcaccacgatggagggagagatatcacttcgggactcta
gtcgtgggccgcgcgaatggtgatattgagctgtgcgaatggacgggggatcaacaggtt
gagacgccgcaggcatgggtagtgaggaagactttccctggtcctcgaccgtccaaggtg
gattcgcttgcacttgcattacgctacccggaacgcgcgaaacctgaagatgtgcccacc
acatccgagctgaggttattcaccgctggagggggaacagacgtgatcgaatgggacatg
agctcgggtagcattttgcggactatgtcctcgcaagggggaaccatctggtccatggcc
gtcaatcctggttctacaatgcttgccttgggatgcgaagacggtgccatccgtattcta
tcgcttgaacttggctccttacagcaccatcggcgactcgaccgcgtgaaaactcgcata
ctcagccttgcatggggtccacccatcgtaaaacggaacagcgtaaacggctccgacagt
gatgatgaagaggaggaggatgaatgggcagacgagtggctcgttgcgggtgggtctgat
agtagcttgcggaaatgggaccttgcctccggtcgtgtggtagacaggatgggcacagac
aagatcaagggagagcggacgctggtgtgggccgtgcaaacgctcggggacggaaccatt
atatctggggactctatgggcatggtcaaattttgggactcgaggacatgcacgcaacta
cagagtttccctgctcatggggcggacgtgctctgtatggctatcagccctgagggcagc
accgtctatacatcaggtgtagaccagaaaatcgctcagttctccttagtcaggaccgcc
tcaaccggctcatcgttcctgcaccagcctcaaaaatgggttcacacagtttctcgccgc
cttcactctcacgatgtacgcgcgctcgccatctggccgccatataccctcgtaccgccg
tcgcatcgccccgtgtaccctgtcggcgtcgcgccagttcttgtctccggtggtctcgat
atgaacatggtactcacacctgccgcctcggcgccgagcacgtctgtggcgaagatcatc
aatccgttgtctacgagcgtgacggcgacgttcgaagacgcgtatcatcgaaggttggcg
tactccgctcggaccgtttgcgtggcaaggctggccaggctggttgtttctgctagcgag
tccggagtatccatctggagagttcatcctcaaaattcaactagcgaggaagatcctgcg
tatctcgatggcttcgaccctgaaggccagcgcggtggctgggaaaagattttggagatg
gaattggcctttaccactaacatcgtggcatgcgggatttcgcaagatggtcgatggatc
gttgtgtccgatcattacgagacgaagctcttcgcgctccattctacagacgacggcacc
ctcaaaccgaagcgcgtccgcgactttgctgccattcttgtcgagtctttgccttcgacg
tcgagagctgcaccttctactggtggaacggcgtttgtgttcacgcccgactcgctgaag
ctcgtcatgtcgacaacgagcgcatatattttgatcatcgatttgtcgtccgaacggcct
cgggttgtgcgacgattcgaacagcacaggatggagcacgttggcatagggaaagccgcg
aggaccaaacagggtgggcacgaggctgctatggacgtcgatggagaaggctcggaggac
gatgaagaggaacagattccgtcaggcgacgatgctgtcgggatcagtgtctcgaggatg
tgtgttagcacggacgggcagtggcttgccaccacggatgaccggtgtcgcacttacata
ttcaacctggattccatacaacaccattctgtggtcccaacaatgccccaacccatacac
gctatggcattcaacccctctgcatcaagaacaacaactctgatcatggcgctcgccaat
aacacgatacaaatctacgatgtggacgcgcgcgagttccccaactgggcccgcgagctg
agcgcctccctcccgaaacgctttacgggcattcacgactccgtcatcggcgttaccttt
gaccctgcgtccgcttctacggagggtgcggtcgcgctgttctggggcgcgacgtggata
tgcaaggtccagctggaccgcccggccggctggggcggattctccaggaaacgaaggaga
gcacaaaaaggaggagcaaacgaggctggcatggtcatcgccgacatctcccagcagcag
cagaacttcaaggtggtgacgcattacaggccgatattggcgcttgacttctttgggccg
cgggagatggtcgtggtggaacgtccgttagtggatgttctggcgaggctcccccctgcg
tatttcagaccaaagtatggtcggtcatag
DBGET
integrated database retrieval system