Punctularia strigosozonata: PUNSTDRAFT_95545
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Entry
PUNSTDRAFT_95545 CDS
T03131
Name
(RefSeq) U3 snoRNP-associated protein Rrp5
KO
K14792
rRNA biogenesis protein RRP5
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psq03009
]
PUNSTDRAFT_95545
Ribosome biogenesis [BR:
psq03009
]
Eukaryotic type
90S particles
Other 90S particles
PUNSTDRAFT_95545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Spt6_S1
Suf
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_19
RNase_II_C_S1
TPR_12
DUF2110
TPR_21
TPR_16
ANAPC3
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
18886707
NCBI-ProteinID:
XP_007378951
JGI:
95545
LinkDB
All DBs
Position
Unknown
AA seq
1502 aa
AA seq
DB search
MSNTKKRQLDAASQSNKPKRAKLDESHKKAERATEKSDQPSTLLVQEDVDFPRGGGTNLT
PMEVKTIRAEAAKEADEVLFKEAATRKSLKGRKSTIKSKAKGGEATKPDTIRVEHLNYKA
SHCLTRITTGMKILGQIVAVQPLALIVSLPNQLMGHIPITQISSQLTSALEAMDEGDETE
SDAMESDSRASPSRPHKPRIPELFDIFHVGQFVRCVVTAIHTPGTTDNTGLGLKGRGDLE
KASRRVELSVAPHLVNAGVVKADLKPGFTLSAAIKSVEDHGYVLDLGMGDGISAFLSFEA
AKQAPWNTEAGLCVGQVVDVNIVSLAKSGRTCTVSVDPEVFTSVSLSEVSNVSSILPGAM
VQCLITAVVPSGLNLQVLGYFEGTVDLFHLPYGTPGDTYKNGSKIKARILYDLSATSPRR
FALSLAEHILTLSMKGRAAAVDGSSKPLSLLQDDFPVGTTLEAAKVIRVEPERGLVLEVS
DDTNGYVHISQVSDDHVAALSSSSGPWRVSTIHRARVTGYHALDGLLQLSLRPSVLEKRF
IQVRDAEVGEVIKGTVKKLTDSALFVEISGNVDGVVWPNHYADITLKHPQKRFKPGGSIK
CRVLAVNPERNRISLTAKKTLVESPLPIVKQVEDAIVGLVTHAVIFRVSDKGLQVEFFNN
LKAFVPRKEASDIMGVDLSATIPVGKPVKVRILSVDPATGRITASIRQAVDAQSASPVAD
VNVGDVVSGSVAELHKDNVLLSLKPSQAKGLLSLNNLANYRGISASQLRASLVTGEMLNN
LVVVSRNANKGIVIVATKPVVRAPMTQGSALSMDTVEVGSVVGGRVLRHTRKGALIKLNA
RITGLLHPTDCTDNFEEGNAFPAVDSILKAVVVEVDKSRNQLVLSMRRSRMDPTSNNTVE
DPEVLAIADLQAGQTIRGFIKSVSEHGLYVMLGRNIDARVQIRELFDEYVKDWKSRFSPN
QIVKGRILSVDQDKKQVEMSFRSVSSSSGSKTKLLLSDLTEGQKIEGKVKKVEDYGIFIE
LEGSKLSGLCHKTQISDNPDADVNLALRSFREGDKVKAMVLSVDHEKRRISLGLKPSYFT
EADFESGDESGSETSSHIGILSEGHIDEEAVSPEEDMNDVASSHFNNDAENDSDADHTMQ
VDVEALTTGANDARQDYSTEQSTSAPKDLILKLEGGFQWSAKDSATHDEESGSESSADED
NDESATQRKRKRRKQIEQDLTADLHNKMPESTADFERVLLSSPDSSYLWIQYMSFLLQMS
EVDRAREIGRRALRTINFREEQEKLNVWIALLNLENVYGTDESLESVFKEAARSNDSKTI
HLRLASIFDQSGKHEMAEEQYKRTAKKFGHSSKVWTLYGEHYLKRGEHEQARKLLPRSLQ
SLEKRKHLKTISKFAQLEYKYGDAERGRTIFEGIVDSHSKRWDIWAIYMDMEAGQSNIQG
LRNLFDRVLTQKMTSHKAKRVPSFFKKWLELERSIGDEDGAEIVKAKAIEWTQRASGNPG
VE
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacacgaagaagcggcaattggacgcagccagccagtccaacaaaccgaagcga
gcgaaattggacgaatcgcataagaaggctgaacgtgctaccgagaaatcagaccaacct
tctactttgcttgtccaagaagatgtcgactttcctagaggcggtggtaccaacttgact
ccgatggaggtcaagaccatccgcgccgaagcagcgaaggaggcagacgaagtcctattc
aaggaggcagccacgagaaagtcgcttaaaggacgcaagtcaaccatcaaaagcaaggcg
aaaggcggggaagctacgaagcctgatacaatacgcgtagagcatctcaattacaaggca
agccattgcttgacgcgcatcactacggggatgaaaatacttgggcaaatagtagctgtt
caaccccttgctctcatagtttcactacccaatcaactcatgggacatataccaatcacc
caaatatcctctcagcttacaagcgctttagaagccatggacgaaggcgatgagacagaa
tccgacgctatggagtccgatagtcgcgctagcccttctcgcccgcacaagccgcgcatt
ccggagttattcgacatatttcatgtgggacagttcgttcgctgcgtggtcacagcaatc
cacacccctggaacgacggataacacaggtcttggattgaaaggccgaggagacctcgag
aaggccagtcggagagtggagctcagcgtagccccgcatctagtgaatgctggcgtcgtc
aaggctgatttaaaacctggttttacactgtctgcggcaataaaaagtgtagaggatcac
ggctacgttttggatttaggcatgggtgacggaatatccgcgtttctctcttttgaggcg
gcaaaacaagccccctggaatacagaagctggcttatgtgttggccaagtggtcgatgtc
aacatcgtttctttggcaaagagtggtagaacttgcacggtgtccgtagatcctgaagtc
ttcacctctgtatcgctgtcggaggtcagcaatgtttcctctatcctgccgggtgccatg
gtgcaatgcctgatcacggcggtcgtgccgagcggcctgaatctccaagtgcttgggtac
tttgaggggaccgtggacctcttccacttaccgtatggaactcctggagacacgtacaag
aacggtagcaaaatcaaggcgaggatcttatacgatctcagtgctactagtccccgtcga
tttgcattatcattagccgaacacatcttaacgttgagcatgaaaggcagagctgctgcg
gtcgatggctcgtcaaaaccgctttcacttctgcaggatgatttccctgtcgggactacc
ttggaggccgcgaaagtgatacgggtagaacctgaacgaggcctagtgctcgaggtttca
gatgacacgaacggctatgttcacatctcccaagtatcggacgatcatgtggccgctctc
tccagttcatcaggaccctggcgggtatcgacgattcaccgtgcgcgcgtgacagggtac
catgcgttggacgggctccttcagttatccttacgcccatcggttctcgagaagaggttc
attcaggttcgcgatgcggaggttggcgaggtaatcaagggaaccgtcaagaagttaaca
gactcagccctcttcgtggagatttcaggcaacgtcgatggcgttgtttggccaaatcat
tatgcagatataactctgaagcatcctcaaaagcggttcaaaccaggcggcagcatcaag
tgtcgcgtgctggccgtcaatcctgaacggaatcgtatctcgttaacggcgaagaaaacg
ctggtcgagtctccgcttccaatcgtcaaacaagtggaagatgctatagttggattggtc
acgcacgctgtaatttttcgtgtgtccgacaagggccttcaggttgagtttttcaacaac
ctgaaggcgtttgtaccccgcaaagaagcaagtgacataatgggtgtcgatctatccgcc
accatccctgtcggcaagcctgtgaaggttcgcatcctctctgtggatcccgccaccggc
cgtatcactgccagcatccggcaggctgtcgacgcccagtctgcatctcccgttgccgat
gtcaacgtaggcgatgtggtctctggctctgtcgccgagctccataaggacaacgtgctc
ctgtccttgaagcctagtcaagccaagggactattatctctgaacaaccttgcgaattac
cgaggcatttctgcctcacagcttcgcgcttcgcttgtcaccggcgaaatgctgaacaac
ttggttgttgtgtcacgaaatgcgaacaaaggcattgttatcgtggcaacgaaacccgtt
gttagggcccccatgacgcaaggctcggccctcagcatggataccgtcgaagtcggatcg
gtcgttggtggtcgcgttcttcgacataccaggaagggtgcattgatcaagctgaatgcg
cgcatcaccggtttgctgcatcctaccgattgtacagacaacttcgaggaagggaacgcg
ttcccggccgtcgattccatcctcaaggccgttgtagttgaggtggataagtctcggaat
caactggtattgtctatgaggcgctctcgtatggatccaacgtcaaacaacacggtagaa
gaccccgaggtccttgccatcgcggatttgcaagccggacaaacgatacgtggttttatc
aagagcgtttctgaacatggcttgtacgtcatgctcgggcgcaacatcgacgctcgtgtt
caaatacgggagttgttcgatgagtacgtcaaggattggaagagccggttctcacccaac
caaatcgtcaagggtcggatacttagtgtcgatcaggataagaagcaggtggaaatgtcg
ttccgttctgtcagttcatcctcggggtccaaaacaaaactcttgctgtctgacttgacg
gagggtcaaaaaattgaagggaaggtcaaaaaggtcgaagactacggcatcttcatcgaa
ttagaaggatccaaactgagcggcttgtgccacaaaactcaaatttccgataacccggat
gcggacgtgaatctagccttacgtagtttccgtgagggcgacaaagtgaaagctatggtg
ctctctgtcgatcacgaaaagcggcgcatttcgctgggcttgaagccgtcttacttcaca
gaggccgatttcgagtcaggtgatgaatcaggatctgagacgagcagtcacatagggatt
ctctcggaaggtcacatcgacgaagaggccgtgtcccccgaagaggacatgaatgatgtc
gcgagtagccatttcaataacgatgctgagaacgacagcgatgccgaccacaccatgcaa
gttgatgtggaagctcttaccactggtgcaaacgatgcacgtcaagactattcaactgaa
caatctacatccgctccgaaggatctcattctcaagctcgaaggaggatttcaatggtct
gcgaaggatagtgcaactcatgacgaggaatcgggctcggagtcgtcagcagacgaggac
aacgatgaatcagctacccaaaggaaacgaaaacgtcgcaagcagattgaacaagatctg
actgccgatctgcacaacaagatgccggagtctaccgctgacttcgagcgagtcttactc
agttcaccagactcgtcctatctttggatacagtacatgtcgttcctactgcagatgtcg
gaggtcgatagggcgcgcgagatagggcgtcgtgcactcaggacgatcaacttccgggaa
gaacaagagaaactgaacgtgtggatcgctctcttaaacctcgagaatgtctacggaacc
gacgaatcactggaaagtgttttcaaggaagccgctcgcagcaacgactcgaagaccatt
catctgcgcctcgcttccattttcgaccaaagtggcaagcacgagatggcagaagagcag
tacaagcggacagcgaagaagttcgggcatagctccaaggtttggacgctgtatggggag
cattatttgaaacgtggtgaacacgagcaagctcgcaaacttctcccccgtagtctgcaa
agtctcgagaaacggaaacacctgaaaaccatatccaagtttgctcagcttgaatataaa
tacggcgatgcagagcgaggcaggaccatcttcgaaggcatcgtagactcgcattccaaa
cggtgggatatatgggcaatatacatggacatggaagctggacagtccaatatccaaggc
ttacgtaacctcttcgaccgcgttctgactcagaagatgacaagtcacaaagcgaagcga
gttccatctttcttcaaaaaatggctggagttagagcgcagcatcggcgatgaagatggt
gcagagattgtcaaggctaaagccatcgaatggacgcagagagcgagtggaaatcctggt
gtcgaatga
DBGET
integrated database retrieval system
