Punctularia strigosozonata: PUNSTDRAFT_95789
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Entry
PUNSTDRAFT_95789 CDS
T03131
Name
(RefSeq) putative rRNA pseudouridine synthase
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
psq
Punctularia strigosozonata
Pathway
psq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PUNSTDRAFT_95789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psq03009
]
PUNSTDRAFT_95789
03032 DNA replication proteins [BR:
psq03032
]
PUNSTDRAFT_95789
Ribosome biogenesis [BR:
psq03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
PUNSTDRAFT_95789
Prokaryotic type
PUNSTDRAFT_95789
DNA replication proteins [BR:
psq03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
PUNSTDRAFT_95789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
Motif
Other DBs
NCBI-GeneID:
18886727
NCBI-ProteinID:
XP_007379079
JGI:
95789
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MAPPANLTKEQVASVQLDGDFALKPEKSEPKLDTSQWPLLLKNYDKLLVRSAHFTPIPSG
CPPLKRDITSYIKSGVINLDKPSNPSSHEVVAWLRRILRVEKTGHSGTLDPKVTGCLIVC
IDRATRLVKSQQGAGKEYVAVLRLHDGLSDPATLPRALQTLTGALFQRPPLISAVKRQLR
IRTIYESKLLEFDEQRNLAVFWVSCEAGTYIRTLCVHLGLILGVGGHMQELRRVRSGALS
ENDDIVTMHDVMDAQWMYDNTRDESYLRRVIRPLECLLVGYKRIVVKDSAVNAVCYGAKL
MIPGLLRYEADISVHEEVVLMTTKGEAIALAIAQMSTVELATCDHGVVAKVKRCIMERDT
YPRRWGLGPVAAQKKKMVKDGKLSKFGEKIEGVTPAEWSKDYVDYNREQPAAGPSTTVPT
GAAIEVPPAPTVPAADTTSEAALSKEEKKEKKRKRKSELPEIDPDVSMAVSEPANGEDDE
AKAERKRKKKEEKEKKKAAGEAAADEDGDEAAKREKKRLKREAKKARESMGGES
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccggcaaacctcaccaaggagcaggtcgcctccgtccagctagatggcgac
tttgccctcaagccggagaagtctgagccaaagctcgacacatctcaatggccccttctg
ttaaaaaactacgacaaactgcttgtccgttccgcgcatttcacccccattccctccggt
tgccctcctttgaaaagggacatcacgtcctacatcaagtccggcgtcatcaacttggac
aaaccctccaacccctcgtcgcatgaagtcgttgcttggcttcggcgaatcctgcgcgtg
gagaaaactggccacagtggcactcttgacccgaaggtcaccgggtgcctgatcgtctgt
atcgaccgcgcgactcgattggtcaagtcacaacagggagccggcaaggaatacgtggcc
gtccttcgcctgcacgacggtctttcggacccggcaactcttccccgcgcccttcagact
cttaccggcgctctcttccaacgtccgcccctcatatccgctgtgaaacgccaacttcgt
atccgaactatatacgagtctaaactgctcgaattcgatgaacagcgcaatttggccgta
ttctgggtgtcgtgcgaggcgggaacctacatacggacgctctgcgtgcacttgggtctg
atcctcggtgtcggcggacacatgcaagagctgcgtcgtgtccgcagtggtgcattatca
gaaaacgacgacatagtcactatgcatgatgttatggacgcgcaatggatgtacgacaac
actcgtgatgaatcgtatcttcggcgtgtgatccgccccctcgaatgcctacttgtgggt
tataagcggatcgtggtcaaagatagcgcagtgaatgctgtttgctacggagcgaagctt
atgatacccggtctcctacgctatgaagccgacatctcggtccacgaggaggttgttctt
atgaccaccaaaggcgaggcaatcgctctcgctatcgcccagatgtcgactgttgaactc
gcgacctgcgaccacggcgtcgtggctaaagtcaaacgctgcattatggagagggacacc
tacccgcgccgctggggccttggccctgtggctgcccagaaaaagaaaatggtaaaggat
ggcaagctcagcaagttcggcgagaaaatcgagggcgtcactccagccgagtggagcaag
gattatgtcgattataaccgcgagcagcccgctgcagggccatcaacgacggtgcctact
ggcgccgccatcgaggttccaccagctcctacggtccccgctgctgatactacctccgaa
gctgcgttgtcgaaggaagagaagaaggagaagaagcgcaagcgcaagtcggagttgcct
gagattgatcccgacgtatccatggcggtgtctgaaccggctaacggtgaggacgacgaa
gcgaaagcagaaaggaaacggaagaagaaggaggaaaaggagaagaagaaagctgcaggt
gaggcagcagcggacgaggatggggatgaagcggcaaaacgggagaagaagcgtctgaaa
agggaagcaaagaaggcgagggagtccatgggcggcgagtcatga
DBGET
integrated database retrieval system
