Stutzerimonas stutzeri DSM 4166: PSTAA_0136
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Entry
PSTAA_0136 CDS
T01976
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psr
Stutzerimonas stutzeri DSM 4166
Pathway
psr03030
DNA replication
psr03410
Base excision repair
psr03420
Nucleotide excision repair
psr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSTAA_0136 (polA)
03410 Base excision repair
PSTAA_0136 (polA)
03420 Nucleotide excision repair
PSTAA_0136 (polA)
03440 Homologous recombination
PSTAA_0136 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psr03032
]
PSTAA_0136 (polA)
03400 DNA repair and recombination proteins [BR:
psr03400
]
PSTAA_0136 (polA)
Enzymes [BR:
psr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSTAA_0136 (polA)
DNA replication proteins [BR:
psr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSTAA_0136 (polA)
DNA repair and recombination proteins [BR:
psr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSTAA_0136 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSTAA_0136 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AEA82057
LinkDB
All DBs
Position
159318..162062
Genome browser
AA seq
914 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFD
AKGPTFRDALFENYKSHRPPMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
QCAALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKAKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYEHLDQVAGLPIRGAKSLGAKLEEHRDA
AFMSYELATIKIDVALDVEVGDLMPGEPHREALIALYRELEFKQWLDELLREAKAAGENC
EVQPEGCSIQAEAQYETLLEQADFERWLARLKAAECFAFDTETTSLDAQRAELVGVSFAV
EPGQAAYVPLRHSYMGVPQQLELDAVLGALKPLLEDPAKTKICQHGKYDMNVLMHYGIEM
RGMAFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQAG
PYAAEDADVTLRLHQTLLGKLEQTPSLLKVLTEIEMPLVPVLARIERNGALVDAQLLGQQ
SVELGDKLVQLEREAFDIAGEEFNLGSPKQLCAILYDKLGCPVISKTAGGQPSTAESVLA
ELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHLAQDAGLLHAFQNDLDVH
RATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYFAR
YPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAAD
IIKRAMIAVDGWLQDSGLDARVILQVHDELVLEVREDLVEQVREAICPLMSGAAQLDVPL
LVEAGVGNSWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcctacctgtaccgcgccttccac
gcactgcctccgctgaccacctctaccggcaagccgaccggtgcggtcaagggtgtgctg
aacatgttgcttagcctgcgcaggcagtatccggacagcccgttcgcagtggttttcgac
gccaagggtccgacctttcgcgacgcgctgttcgagaactacaagtcgcaccgcccgccg
atgcccgacgacctgcgcgtgcaggtcgagccgctgcatgccagcgtccgtgcactgggg
ctgccgctgctgtgcgtggaaggggtcgaggcagacgatgtcatcggcaccctggcgcgg
caatgcgcggcgctgggccgtgatgtggtgatctccaccggcgacaaggacatggcccag
ctggtctgcccgcacgtcaccctggtcaacaccatgaccggcagcgtctatgacatcgag
ggcgtgaaggccaagttcggcgtcggcccggaactgatcatcgacttcctcgcgctgatg
ggcgacaaggtcgacaacattcctggcgtgccaggcgtgggcgagaagacggcatgtggc
ctgctcaacggcatcccgggcgggctcaaggggctctacgagcacctcgaccaggtcgcc
ggactaccgatccgcggcgccaagtcactaggcgccaagctggaggagcatcgcgatgcc
gccttcatgtcctacgagctggcgaccatcaagatcgacgtggcgctggacgtcgaggtc
ggtgacctgatgcccggtgaaccgcaccgcgaggcgctgatcgccctttatcgcgagctg
gagttcaagcagtggctggacgagctgctgcgcgaggccaaggcggcgggggagaactgc
gaggtgcagccagaaggctgttcgatccaggccgaggcccagtacgagaccctactggag
caggccgatttcgagcgctggctggcgcgtctgaaggcggccgaatgttttgccttcgat
accgaaaccaccagcctcgatgcgcagcgcgccgagctggtcggcgtgtctttcgccgtg
gagccgggccaggcggcatacgtgccgctgcgccattcctacatgggcgtgccgcagcag
ctcgagctggatgccgtgctcggcgcgctcaagccgctgctggaagatccggccaagacc
aagatctgccagcacggcaaatacgacatgaacgtgctgatgcactacggcatcgagatg
cgcggcatggctttcgacaccatgctcgaatcctacgtgctggacgccacggccacccgt
cacgacatggacagcctggcgctcaagtacctcggccgcggcaccatccgcttcgaggac
attgccggcaagggcgccaagcagctgaccttcgaccagatcgccatcgagcaggccggc
ccgtatgccgccgaggacgccgacgtcaccctgcgcctgcaccagaccctgctcggcaag
ctggagcagacgccatcgctgctcaaggtgctgaccgagatcgagatgccgctggtgccg
gtgctggcgcgcatcgagcgcaacggcgcgctggtcgatgcacagttgcttggccagcag
agcgtcgagctgggcgacaagctggtgcagctggaacgcgaggcgttcgacatcgctggc
gaggagttcaacctcggctcgcccaagcagctctgcgcgattctctacgacaagctcggc
tgcccggtgatctccaagaccgccggcggccagccgtcaacggccgagagcgtgctggcc
gaactggccgagcaggattacccgctgccaaaggtcatcatgcagcaccgcagcctgagc
aagctcaagggcacctacaccgacaagctgccgcagcagatcaacccgcgcaccgggcgc
atccacaccagctaccaccaggcggtgaccgccaccggccggctgtcctccagcgacccg
aacctgcagaacatcccgatccgcaccgccgaggggcggcgcattcgccaggccttcgtc
gcggcgccgggctacaagctgctggcggcggactactcgcaaatcgagctgcgcatcatg
gcccacctggctcaggatgccggcctcttgcacgcgttccagaacgacctggacgtgcac
cgcgccacggccgccgaggtgttcggcgtaccgctggagcaggtcagcaacgaccagcgc
cgcagcgccaaggccatcaacttcggcctgatctacggcatgagcgccttcggcctggcc
aagcagatcgacgtcggccgcaaggaagcgcaggagtacatcgaccgctatttcgcccgc
taccccggcgtgctcgcctacatggagcgcacccgcacccaggccgccgagcagggctat
gtcgagacgctgttcggtcggcggctgtacctgccggagatcaattcgaagaacggcgcc
atgcgcaagggcgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcagcggac
atcatcaagcgcgccatgatcgccgtggacggctggctgcaggacagcgggctggatgcg
cgggtgatcctgcaggtccacgatgaattggtgctggaagtgcgcgaagacctggtcgag
caggtccgcgaagccatctgcccgctgatgagcggggccgcccagctggacgtgccgctg
ctggtcgaggcgggcgttggcaacagctgggacgaggcgcactga
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