Stutzerimonas stutzeri DSM 4166: PSTAA_0236
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Entry
PSTAA_0236 CDS
T01976
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psr
Stutzerimonas stutzeri DSM 4166
Pathway
psr03420
Nucleotide excision repair
psr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSTAA_0236 (uvrD)
03430 Mismatch repair
PSTAA_0236 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psr03400
]
PSTAA_0236 (uvrD)
Enzymes [BR:
psr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSTAA_0236 (uvrD)
DNA repair and recombination proteins [BR:
psr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSTAA_0236 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PSTAA_0236 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_22
TnpC_reg
Motif
Other DBs
NCBI-ProteinID:
AEA82157
LinkDB
All DBs
Position
complement(260829..263018)
Genome browser
AA seq
729 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAALLGRQLVLAGAGSGKTRVLVHRIAWLHQVERASLHSIL
SVTFTNKAAAEMRQRIEQLLHVNPQGMWVGTFHGLAHRLLRAHWREAKLAENFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWWINAQKDEGLRPRNIQPGGDLFLATQLKIYEAYE
EACARAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLAK
GGESLMVVGDDDQSIYGWRGARIENLHQFSADFPDAETIRLEQNYRSTACILKAANALIA
NNQGRLGKELWTSGCEGEPISLYAAFNEHDEARYVVESIEKAIRDGMSRSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLIQTRDNDAALERVINVPARGI
GEKTVECLRQLAREQGLSMWAALHQAVGTKAVSGRAASALNGFVELVDTLALKVEKLPLH
SMAQLVIEESGLLAYHRDEKGEKAQARVENLEELVSAARAFDSYSEEEDDIQSPLAAFLD
HASLEAGEQQAGDHEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEER
RLAYVGITRAMQQLVITYAETRRLYGSETYNKVSRFVREIPPALVQEVRLSNTVTRSFSG
KSMSGSSLFDGAGVPETPFNLGQRVRHSLFGEGTILNFEGAGAQARVQVNFEDEGSKWLM
LSYAKLEAL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgatctctcccttctcctgaattccctcaacgatgcccagcgccaggccgtg
gccgcgctgctgggccggcaactggtgctggccggcgccggctcgggcaagacccgtgta
ctggtgcaccgcatcgcctggctgcaccaggtcgagcgcgcatcattgcactcgatcctg
tcggtgacctttaccaacaaggccgccgccgagatgcgccagcgtatcgagcagctgctg
cacgtcaacccgcagggcatgtgggtcggcaccttccacggcctggcccaccgcctgctg
cgtgctcactggcgcgaggcgaagctggcggagaatttccagattctcgactccgacgac
cagcagcgcttggtcaagcgggtgatccgcgagctcggcctcgatgagcagcgctggccg
gcgcgccaggcgcagtggtggatcaacgcgcagaaggacgaaggcctgcgtccacgcaac
atccagcccggcggtgatctgttcctcgccacacagctgaagatctacgaagcctatgaa
gaggcctgcgcccgcgctggcgtcatcgacttctccgagctgctgctgcgtgcgctggat
ctgtggcgcgaccaccccggcctgctcgagcactaccagcggcgcttccgccatgtgctg
gtggatgagttccaggacaccaacgccgtccagtacgcctggctgcggctgctggccaag
ggtggcgagagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgcggc
gcgcgcatcgagaacctgcaccagttcagcgccgacttcccggatgccgaaaccatccgc
ctggaacagaactaccgctccaccgcctgcatcctcaaggccgccaacgcgctgatcgcc
aacaaccagggtcgcctcggcaaggaactctggacctccggctgcgagggcgagccgatc
agcctgtacgctgccttcaacgagcacgacgaagcgcgttacgtggtcgagagcatcgag
aaagccatccgcgacggcatgagccgcagcgagatcgccatcctctaccgttccaacgcc
cagtcgcgggtactggaagaggcgctgctgcgcgagaagatcccctaccgcatctacggc
ggccagcgcttcttcgagcgtgccgagatcaagaacgccatggcctacttgcgcctgatc
cagacccgcgacaacgacgcggcgctggagcgggtgatcaacgtgccggcccgcggcatc
ggcgagaagaccgtcgaatgcctgcgtcagctggcccgtgaacagggcctgtcgatgtgg
gctgcgctgcaccaggcggtcggcaccaaggcggtttccgggcgcgccgccagcgcgctg
aacggcttcgtcgaactggtcgacaccctggcgctgaaggtcgagaaactgccgctgcac
agcatggcgcaactggtcatcgaggaatccgggctgctggcctaccaccgcgacgagaag
ggcgagaaggcccaggcgcgagtggaaaacctcgaggaactggtctccgccgcccgcgct
ttcgacagttacagcgaagaggaagacgacatccagtcgcccctggccgccttcctcgac
cacgcctcgctggaggccggcgaacaacaggccggcgaccacgaggacagcgtgcagctg
atgaccctgcacagcgccaagggtctggagtttccgctggtgttcctggtcggcatggaa
gaaggcctgttcccgcacaagatgagcctggaggagtccggccgtctggaagaggaacgc
cgcctggcttacgtgggcatcacccgcgccatgcagcagctggtgatcacctacgccgaa
acgcgccggctgtacggcagcgagacctacaacaaggtctcgcgcttcgtccgcgaaatt
ccaccggcgctggtgcaggaagtgcggctgagcaacacggtgacgcgctcgttcagcggc
aagagtatgagcggctcgtcgctgttcgacggcgccggcgtgccggaaacaccgttcaac
ctcggccaacgcgtgcgccattcgctgttcggcgaaggcaccatcctcaacttcgaaggc
gccggcgcccaggctcgggtgcaggtgaatttcgaggacgagggcagcaaatggctgatg
ctcagctacgcaaaacttgaagccctgtga
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