Stutzerimonas stutzeri DSM 4166: PSTAA_0564
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Entry
PSTAA_0564 CDS
T01976
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psr
Stutzerimonas stutzeri DSM 4166
Pathway
psr00300
Lysine biosynthesis
psr00470
D-Amino acid metabolism
psr01100
Metabolic pathways
psr01110
Biosynthesis of secondary metabolites
psr01120
Microbial metabolism in diverse environments
psr01230
Biosynthesis of amino acids
Module
psr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSTAA_0564 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSTAA_0564 (dapF)
Enzymes [BR:
psr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSTAA_0564 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DUF3261
Motif
Other DBs
NCBI-ProteinID:
AEA82484
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Position
complement(618956..619786)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVIDLVSQHAHIQPKHAKQWGDRHTGVGFDQLLIVEPPQNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVVDKRLTVKRKIKVETKGGIIELDIRPDGQIRVDM
GPPRLVPAEIPFQAEREALSYSLEVDGQQVELAAVSMGNPHAVLRVDSVERAPVHELGPK
IEHHPRFPQRVNVGFLQVVDRRHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPV
QIELPGGRLSIEWAGPGQPVMMTGPAVRVFEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgcgctttaccaagatgcacggtctgggcaacgacttcatggtcatcgacctg
gtcagccagcacgcgcacatccagcccaagcacgccaagcaatggggcgatcgtcacacc
ggcgtcggcttcgatcagctgctgatcgtcgagccgccacagaatccggatgtggatttt
cgctaccgcatcttcaactccgacggttcggaagtggagcaatgcggcaacggcgcgcgc
tgcttcgcccgcttcgtggtcgacaagcgcctgactgtcaaacgcaagatcaaggtggaa
accaagggcggcatcatcgagctggacatccgccccgatggacagatccgcgtcgacatg
ggcccgccgcgcctggtgcctgccgagataccgtttcaggccgagcgagaagccctgagc
tattcgctcgaggtggacgggcagcaggtcgaactggccgcggtatccatgggcaacccc
catgcagtgctgcgggtggacagtgtcgagcgtgcgccggtgcatgaactggggccgaag
atcgagcatcacccgcgctttccgcagcgggtcaacgtcggcttcctgcaggtggttgat
cgccgccatgcgcggctgcgcgtatgggagcgcggcgccggtgagacccaggcctgcggc
accggtgcctgtgcggccgcggtagccgccattcgccagggctggatggactcgccggtg
cagatcgaactgcccggcggccgtctgtccatcgaatgggcaggtccggggcagccggtt
atgatgaccggccccgccgttcgcgtttttgaaggacaggttcgcctatga
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