Stutzerimonas stutzeri DSM 4166: PSTAA_0598
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Entry
PSTAA_0598 CDS
T01976
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
psr
Stutzerimonas stutzeri DSM 4166
Pathway
psr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSTAA_0598 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psr03021
]
PSTAA_0598 (rho)
03019 Messenger RNA biogenesis [BR:
psr03019
]
PSTAA_0598 (rho)
Transcription machinery [BR:
psr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PSTAA_0598 (rho)
Messenger RNA biogenesis [BR:
psr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PSTAA_0598 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
NACHT
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
AEA82518
LinkDB
All DBs
Position
653143..654402
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLEMAEQMGIDNMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDSIN
YDRPENAKNKILFENLTPLFPNERLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIASNITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNLELQLDRRIAEKRVFPAINI
NRSGTRREELLTAEDELQRIWILRKLLHPMDEIAAIEFLLDKLKDTKTNDEFFMSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgaactcaagcaaaagcccatcaccgaactgctggaaatggccgaacag
atgggcatcgacaacatggcccgttcgcgcaagcaggacgtgattttctccctgctgaaa
aagcacgcgaaaagcggcgaggaaatctccggtgacggcgtgctggagattctccaggac
ggtttcggcttcctgcgctccgcggattcttcctatctggccggcccggacgacatctat
gtgtcgcccagccagatccgtcgcttcaacctgcgtaccggcgacaccatcgtcggcaag
atccgcccgccgaaggaaggcgagcgctacttcgccctgctcaaggtcgactcgatcaac
tacgatcggccggaaaacgcgaagaacaagattctcttcgagaacctgaccccgctgttc
cccaacgagcgcctgaagatggaggccggcaacggctccaccgaagacctcaccggtcgc
gtgatagacctctgcgcaccgatcggcaagggtcagcgcggcctgatcgtcgcgccgccg
aaggcgggcaagacgatcatgctgcagaacatcgccagcaacatcacccgcaacaatccc
gagtgccacctgatcgtcctgctgatcgacgagcgcccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggtggcctccacctttgacgagccgccgacccgccacgtg
caggtcgccgagatggtgatcgagaaggccaagcgcctggtcgagcacaagaaggatgtg
gtcatcctgctcgactccatcactcgcctggcgcgtgcctacaacaccgtgatcccgagc
tccggcaaagtactcaccggtggtgtcgacgcccacgctctggagaagcccaagcgtttc
ttcggcgccgcccgcaacatcgaggagggcggctcgctgaccatcctcgccaccgcgctg
gtggaaaccggctcgaagatggacgaggtgatctacgaggaattcaagggcaccggtaac
ctggagctgcaactggaccgccgcatcgctgaaaagcgtgtgttcccggccatcaacatc
aaccgctccggcacccgccgcgaggagttgctgaccgccgaggacgagctgcagcgcatc
tggatcctgcgcaagctgctgcatccgatggacgagatcgccgccatcgagttcctgctc
gacaagctcaaggacaccaagaccaacgacgaattcttcatgtccatgaagcgcaagtaa
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