Stutzerimonas stutzeri DSM 4166: PSTAA_0787
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Entry
PSTAA_0787 CDS
T01976
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psr
Stutzerimonas stutzeri DSM 4166
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psr03400
]
PSTAA_0787 (sbcC)
DNA repair and recombination proteins [BR:
psr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSTAA_0787 (sbcC)
Archaeal homologous recombinant proteins
PSTAA_0787 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
ABC_tran
AAA_15
Formyl_trans_N
Motif
Other DBs
NCBI-ProteinID:
AEA82697
LinkDB
All DBs
Position
complement(853040..856693)
Genome browser
AA seq
1217 aa
AA seq
DB search
MKILAIRLKNLASLAGEQVIDFTAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR
LDSVSPLNKVPEVDAEIGGGDERNLLRRGCGSGYAEVDFVGVDGHRYRARWEVKRAREKI
DGRLQASSQSLTDLDSGTLLASGKKREFKELLEARLGLTLAQFTRAVLLAQSEFSAFLKA
DDNERGTLLEKLTDTGLYSRLGQAAFEAAKEAKEGLARLEQQAGGLQPLEPEQREVLENE
HQAQLDELKALQQQLKALEAQRQWLSELQRLENEREAACQQLQDAEDERENLAEARRILD
LFEQLAPQRHRFLRLQDLGPLLDKAADSLARLQHEEQAVQQRLAELQSQCSAASEQLRSA
EQARQDAEPRLVQARREEERLQHLNADLAAIREESVQADAAASAGEATLKQLEQQQQRTA
EQLAALAQPLETSAALQPLCAAWDGYRPRLQQAVQLAARLQQGQRELPALEAQAQAAETQ
QNVAREALDDLQRERDSDVGLAEQLARLHRQLDDWRQAERETEALRELWSQQRALEASRR
ELLDAATEQQAELDSLVPLGKQVRIDRDAAEQALTVTLAVLERQRLARSENVEALRAALM
PGEPCPVCGSHEHPWQQTDALVASLARHDDSEAARAQQALQEQDQRLQELRDRHVALSTQ
LRQTQQRQSEVDAQLQALAPRLLALPAYARLLEQPEAERSQWLETQLTTLKGQIASASQL
QQQLLALQQRSETLQQAWQAAREACVEATQRLARQRDALARDSQQLDEELAAFAELLPVE
QLQRWREDPAQTFMQLDASIATRLQQLQAQSELSEELRQGEQRRSDEQLQQRHRQEKQAG
CSVRLAEREKLLLACQQALRTSLGEQSSASAWQHQLDAAIQTARQTQAGIDQQLNESKLG
LTRLHSEQQNCRQRHAELQQERDALNAELGAWRAAHPALDDTTLAQLLQMDDALLAEARQ
RLQQNAETLTRCRERLDGCLNRLASHQQQQAEVPEAEQLQQAHAEQLHRCEQAEQRCAET
RAALLDDDKRRRQSHALLAQIDEARAEMQRWGRIAALIGSSDGGAFRKIAQAYNLDLLVQ
HANVQLRQLARRYRLKRGGSPLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSKLRIESLFIDEGFGSLDPESLQIAMDALDSLQAQGRKVAVISHVAEMHERIPVQIQV
QRQGNGQSGLKIVGGLS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccatccgcctgaagaacctggcctctctggccggtgagcaggtcatc
gatttcaccgccgaacccctggccagcgccgggctgttcgccatcaccgggcccaccggt
gccggcaagagcaccattctcgacgccctgtgcctggcgctgtttggcagcacgccgcgg
ctcgacagcgtttcgccgctgaacaaggtgcccgaggtggatgccgagatcggcggtggc
gacgagcgcaacctgctgcgccgcggctgcggcagcggctacgccgaggtcgatttcgtc
ggcgtcgacggtcaccgctaccgcgcacgctgggaggtcaagcgcgcccgcgagaagatc
gacggccgcctgcaggctagcagccagagccttacggatctcgacagcggcacgctcctg
gccagcggcaagaaacgcgaattcaaggaattgctcgaagcccgccttgggctgaccctg
gcccagttcacccgcgccgtgctgctggcgcagagcgaattttccgccttcctcaaggcc
gacgacaacgagcgcggcaccctcctggaaaagctcaccgataccggcctctacagccgc
ctcggccaggccgccttcgaggccgccaaggaggcgaaggaaggcctcgcccgtctggag
cagcaggccggcggcctgcaaccactggagcccgagcagcgcgaggttctggagaacgaa
catcaggctcagctcgacgaactgaaagcgctgcagcagcagctcaaggcgctggaagcg
cagcggcaatggctcagcgaactgcagcgcctggaaaacgagcgcgaagcggcatgccag
caactgcaggatgccgaagacgagcgcgaaaacctcgccgaggcccggcgcatcctcgac
ctgttcgagcaactggcgccgcaacgccatcgtttcctgcgcctgcaggatctcggcccg
ctgctggacaaggccgccgacagcctggcgcgcctgcagcatgaggaacaggccgtgcag
cagcgcctggccgagctgcagagccaatgcagcgccgccagcgagcaactgcgttcggcc
gaacaggcgcgccaggacgccgagccgcggctcgtccaggcgcgccgtgaagaagaacgc
ctgcagcatttgaacgccgaccttgccgcgatccgcgaagaaagcgtccaggccgatgcc
gcggccagcgccggcgaggcaacgctcaaacagctcgagcagcagcaacagcgcaccgcc
gaacagctcgcggcgctggcacagccactcgaaacgagtgcagccctgcaaccactctgt
gcggcatgggacggttaccgtccgcgtctgcaacaggccgtccagctggcggcacgtctg
cagcaaggccagcgcgagctccccgcgctggaagcgcaggcgcaggccgccgaaacccag
cagaatgtggcccgcgaggcgctggacgacctgcaacgcgagcgcgacagcgacgtcggg
ctggccgaacagctggcccgactgcatcgacagctcgacgactggcgccaggccgagcgc
gaaaccgaggcactgcgcgagctctggtcgcagcagcgtgcgctcgaagccagccggcgc
gaactgttggacgccgccaccgaacagcaggccgaactggacagtctggtaccgctgggc
aaacaggtccgcatcgaccgagatgccgccgagcaggcgctcacggtcacccttgccgtg
ctcgagcgccagcgtctggcgcgcagcgagaatgtcgaggcgttgcgtgcggcactgatg
cccggcgagccctgcccggtctgcggcagccacgagcatccctggcagcagaccgatgcg
ctggttgccagccttgctcggcacgacgacagcgaggccgcgcgcgcgcagcaggcgtta
caggaacaggaccagcgcctgcaggagctgcgcgatcgccatgtcgcgctcagcacacag
ttgcgccagacccagcagcgccagagcgaagtcgacgcgcagctgcaggccctggcgccg
cgcctgctcgctctgcccgcgtacgcacgattgcttgagcagcctgaagccgagcgttcg
caatggttggaaacgcagctgacgactctcaaaggccagatcgccagcgccagccagctt
cagcagcaactgctcgccctgcaacagcgcagcgaaaccctgcagcaggcctggcaggcc
gcgcgcgaggcctgtgtcgaggcgactcaacggctcgcgcgccagcgcgatgccttggcc
cgcgacagccaacaactcgacgaggagctggcggccttcgccgaactgctgcccgtcgag
caactgcagcgctggcgcgaagacccggcgcagacctttatgcagctggacgccagcatc
gccacgcggctgcagcagctgcaggcgcagtccgaactgagcgaggagctgcgccagggc
gaacagcgccgcagcgacgaacagttgcaacagcgccatcgccaggagaaacaggcaggc
tgcagcgtgcggctggctgagcgcgaaaagcttctgctcgcctgccagcaggcgctgcgg
accagccttggcgagcaaagcagcgccagcgcctggcaacatcagctggatgcggccatc
cagactgcgcggcaaacccaggccgggattgatcagcagctcaacgagagcaaacttggc
ctgacgcgcctgcacagcgagcaacagaactgccgccagcgccacgccgagttgcagcag
gaacgcgacgcgctgaacgcggaactgggcgcctggcgcgccgcccatccggcgctggac
gacaccaccctcgcccagctgctgcagatggacgacgcgctgctggccgaggcgcgccag
cgcctgcagcagaacgccgaaaccctgacccgctgccgcgaacggctggatggctgcctc
aatcggctggccagccaccagcagcaacaggccgaggtgccggaagccgagcagttgcaa
caggcacatgccgaacagctgcaccgctgcgaacaggccgagcagcgctgcgccgaaacc
cgggccgcgctgctcgacgacgacaagcgccgccgccagagccacgcgctgctggcacag
atcgacgaggcgcgcgccgaaatgcagcgctgggggcgtatcgccgcgctgatcggctcg
agcgacggcggcgccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcag
cacgccaacgtgcagctgcgtcagctggcgcggcgttatcggctcaagcgcggcggcagt
ccgctgggcctgctggtgatggataccgagatgggcgacgagctgcgctcggtgcattcg
ctgtccggcggcgagaccttcctcgtctcgctggccctggcactgggcctggcctcgatg
gcgtcgagcaagctcaggatcgaatcgctgttcatcgacgagggcttcggcagcctcgat
cccgagtcgctgcagatcgccatggacgcgctggattcgctgcaggcccagggccgcaag
gtggcagtgatcagccacgtggccgagatgcacgaacgcatcccggtgcagattcaggtg
cagcgccagggcaacgggcagagcgggctgaagatcgtcggcgggctgtcctag
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integrated database retrieval system
