Stutzerimonas stutzeri DSM 4166: PSTAA_1395
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Entry
PSTAA_1395 CDS
T01976
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psr
Stutzerimonas stutzeri DSM 4166
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psr03016
]
PSTAA_1395 (rnd)
Enzymes [BR:
psr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PSTAA_1395 (rnd)
Transfer RNA biogenesis [BR:
psr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PSTAA_1395 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AEA83304
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All DBs
Position
1467973..1469097
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AA seq
374 aa
AA seq
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MAIETQWVVDDAHLARLCAEWRQLPFVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPL
AVRDWHPFATLLDDAAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNIGFSMGY
SRLVQAVLGIELPKGETRSDWLQRPLSEMQVRYAAEDAQHLAELYEALLPKLSDDKRAWV
LEDGAELVANLQRESDPEEAYREVKQAWRLKPQQLAVLKVLTAWRERQARARNQPRNRVL
REASLWPLARTQPCDLVTLARIDEMHPRTVRQDGEALLAMIREAAATPEQDWPAALPEPL
PLEVSGVLKKLRAVGQREAKALDIAPELMLRKKTLEALLKSGYPDGPYQLPDSLRGWRRE
RMGQALLDVLEKRS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgaaactcaatgggtcgtggatgatgcacatctggcccgcctctgcgccgaa
tggcgccaactgccatttgtggcggtggacaccgaattcatgagggtggacaccttttat
cccatcgccgggctggtgcaggtcggtgacgggcggcgcgcctatctgatcgacccgctg
gcggtgcgcgattggcatccgtttgccacactgctggacgatgctgctgtggtaaaggtg
ctgcatgcctgcagcgaggacctcgaagtgctgctgcgcctgaccggcagcctgccgcag
ccgctgttcgatacccagttggccgccggctacctgaacatcggcttttccatgggctat
tcgcggctggtccaggccgtgcttggcatcgaactgcccaagggcgaaacgcgctcggac
tggctgcagcggccgctgagcgagatgcaggtgcgctacgccgccgaggatgcgcagcac
ctggccgaactctacgaagcgctgctgccgaagctgtcggacgacaagcgagcctgggtg
ctggaggacggtgccgagctggtcgccaacctgcagcgcgaatccgacccggaggaggcc
tatcgagaggtcaagcaggcctggcgcctcaagcctcaacagctggccgtgctcaaggtg
ctgaccgcctggcgtgagcgccaggcccgagcgcgcaaccagccgcgcaatcgcgtgttg
cgcgaggccagtctgtggccgctggcgcgtacccagccgtgcgatctggttacgctggcg
cgcatcgatgagatgcatccgcgcaccgtacgccaggatggtgaagccttgctggcgatg
atccgcgaggctgccgcgacgcccgaacaggattggccggcggcgctgccggagccgttg
ccgctggaagtttccggcgtgttgaagaagttgcgggcggtcggccagcgcgaggcgaag
gcgctggatatcgcgccggagctgatgctgcgcaagaagaccctggaggcactgctgaaa
agcggttaccccgacggcccttatcaactgcccgattcgctgcgcggctggcgccgcgag
cggatggggcaggccctgctggatgttctggaaaaacgctcatga
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