Stutzerimonas stutzeri DSM 4166: PSTAA_2245
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Entry
PSTAA_2245 CDS
T01976
Name
(GenBank) DNA topoisomerase, type I, putative
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psr
Stutzerimonas stutzeri DSM 4166
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psr03032
]
PSTAA_2245
03400 DNA repair and recombination proteins [BR:
psr03400
]
PSTAA_2245
Enzymes [BR:
psr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSTAA_2245
DNA replication proteins [BR:
psr03032
]
Prokaryotic type
DNA Topoisomerases
PSTAA_2245
DNA repair and recombination proteins [BR:
psr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSTAA_2245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AEA84133
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All DBs
Position
2411021..2412118
Genome browser
AA seq
365 aa
AA seq
DB search
MRHDTATEPPPLAEGTRPVPLDETADTGTLLCPTLPPDLHYVDDAQPGIRRRQLRGKFAY
FAPSGERIRDEEEIRRINKLAIPPAYRDVWICPDPQGHLQATGRDARGRKQYRYHPRWRE
IRDSDKYERMLEFGEALPKLRRDLEKHLALPGMPRDKVMALVVTLLESTLIRIGNSRYAR
DNRSYGLTTLRTRHVNVSSTAVRFHFRGKSGVEHEVTLRDRRLARLMRRCMELPGQQLFQ
YLDEDGQRRAVSSNDVNLYLREMTGRDFTAKDYRTWAGSALALERLRKLDASSASVARQN
LVETVKQVASQLGNTPAVCRQCYIHPAILQAFSDGELVKLRAARKRKWLSAEEVALLAFL
RKAAD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacgacactgcgacggaaccgccacccctggccgagggcacccgccctgtcccg
ctggacgaaaccgccgacaccggcacgctgctttgccctaccctgccacccgacctgcat
tatgtggacgatgcgcagccaggcatccgccgccgacagctgcgtggaaagttcgcctat
ttcgctccgagcggcgagcgcatccgtgacgaagaagagattcgccggatcaacaaactg
gcgatccccccggcctatcgggacgtctggatctgccccgacccgcaagggcatctccag
gccacgggacgcgatgcccgcggacgcaagcagtatcgttaccatccgcgctggcgggaa
atccgcgacagcgacaagtacgagcgcatgctggagttcggcgaagccctgcccaagctg
cgccgcgatctggaaaagcacctggccctgcccggcatgccgcgcgacaaggtcatggcg
ctggtggtcacgttgctcgaatcgaccctgattcgcatcggcaattcccgctacgccagg
gacaaccggtcctacggcctgactacactgcgcacgcgccacgtgaacgttagcagcacc
gcggtccgcttccatttccgcggtaagagtggtgtggagcatgaggtaacgctgcgcgac
cggcgcctggccaggctcatgcgccgctgcatggagctcccgggccagcagttgttccag
tatctggatgaggatggccaacgccgtgcggtcagctccaacgacgtgaatctctattta
cgggaaatgaccggccgcgatttcaccgccaaggactatcggacctgggccggcagcgcg
ttggcgctggaacggttgcgcaagctcgacgcatcctcggcaagcgtcgcgcgacagaac
ctggtggaaaccgtcaagcaggtcgcgagccagctgggcaataccccggcggtctgtcgc
cagtgctatatccatccggcgattctgcaagccttcagcgatggggagctggtcaagcta
cgggcagcgcgcaagcgcaaatggctgagcgccgaggaagtcgccctgcttgcctttctg
cgcaaagcggccgattga
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