Stutzerimonas stutzeri DSM 4166: PSTAA_2615
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Entry
PSTAA_2615 CDS
T01976
Name
(GenBank) DEAD-box ATP dependent DNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psr
Stutzerimonas stutzeri DSM 4166
Pathway
psr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSTAA_2615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psr03019
]
PSTAA_2615
03009 Ribosome biogenesis [BR:
psr03009
]
PSTAA_2615
Enzymes [BR:
psr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSTAA_2615
Messenger RNA biogenesis [BR:
psr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSTAA_2615
Ribosome biogenesis [BR:
psr03009
]
Prokaryotic type
rRNA helicases
PSTAA_2615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
HEM4
AAA_22
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AEA84496
LinkDB
All DBs
Position
complement(2808744..2810414)
Genome browser
AA seq
556 aa
AA seq
DB search
MTQEIGGFAALGIHSAVLAAISAVGYEEPSPIQAQAIPVILGGHDMIGQAQTGTGKTAAF
ALPILSKIDPAKREPQALILAPTRELALQVATAFETYSKQMPDVSVVAIYGGAPMGPQLK
AIRQGAQVIVATPGRLVDHLSRNSELLSTIRFLVLDEADEMLKLGFMDDLEVIFEAMPES
RQSVLFSATLPHSIRAIAEKHLREPQHIKIAAKTQTVARIEQAHLMVHADQKIQAVLRLL
EVEDFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVV
ATDVAARGLDVARITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTNQKVAEARLPNAQQVLDARIKKLTNSLAPLVADAEATHGELLDKLVADIGCSPRAL
AAALLRKATNGQALTLAEVEREQPLVPTSSPRERTERSDRPERSGDRERRAPVPLAEGRA
RCRTPLGARDGIAARNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLDRLLGKLKD
TRVGGKQLKLRRYRED
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaatcggcggctttgccgcactcggtattcactccgctgttctggctgcc
atcagcgcagtcggctacgaagaaccatcccccatccaggcccaggcgatcccggtgatc
cttggtggccacgacatgatcggccaggcccagaccggtaccggcaagaccgccgcattt
gcgctgccgatcctgtccaagatcgatccggccaagcgcgagccgcaggcgctgatcctc
gcgccgacccgcgaattggcgctgcaggtcgccaccgcgttcgaaacctattcaaagcag
atgccggacgtcagcgtcgtcgccatctacggtggtgctccgatgggcccgcagctcaag
gccatccgccagggcgcgcaggtcatcgtcgccactccgggccgcctggtcgaccacctg
agccgtaacagcgagctgctgtcgaccatccgcttcctggtcctcgacgaagccgacgag
atgctcaagctcggcttcatggacgatctggaagtgatcttcgaagccatgccggaaagc
cgccagagcgtgctgttctccgccacgctgccgcactccatccgtgccatcgccgagaag
cacctgcgcgagccgcagcacatcaagatcgctgccaagacccagaccgtcgctcgaatc
gaacaggcgcatctgatggtccatgccgatcagaagatccaggctgtgctgcgcctgctg
gaagtcgaggatttcgacgccctgatcgccttcgtgcgcaccaagcaagccacgctggat
ctggccgccgcgctggaagccaagggctacaaggccgctgcgctgaacggcgatatcgcc
cagaaccagcgtgagcgcgtcatcgaatcgctcaaggatggccgcctggacatcgtcgtc
gccaccgacgtcgctgcccgcggtctcgacgtggcgcgcatcacccacgtattcaacgtg
gacatgccctacgatccggaatcctacgtgcaccgcatcggccgtaccggccgtgccggt
cgcgaaggccgcgcgctgctgctggttaccccgcgtgagcgtcgcatgctgcaggttatc
gagcgcgtgaccaaccagaaggtcgctgaagcccgcctgccgaatgcgcagcaggtgctg
gacgcccgcatcaagaaactcactaacagcctcgcgccgctggttgccgatgccgaagcc
acccatggcgagttgctcgacaagctggtcgccgacatcggttgcagcccgcgtgctctg
gctgctgcgctgttgcgcaaggccaccaatggtcaggctctgaccctggccgaggtggaa
agagagcagccgttggttccgaccagcagcccgcgtgagcgcaccgagcgttcggatcgt
cctgagcgtagtggtgatcgcgagcgtcgcgctccggtcccgctggccgaaggccgcgcc
cgctgccgtacgccgcttggagcgcgtgacggcatcgctgcccgcaacctgctcggcgcc
atactcaacgaaggcggcctggcccgcgaagccatcggccgcatccaggtgcgcgacagc
ttcagcctggtcgagctgccggaagacggccttgaccgcctgctcggcaaactcaaggac
acccgcgtgggcggcaagcagctcaagctgcgccgttatcgcgaagactga
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