Stutzerimonas stutzeri DSM 4166: PSTAA_2881
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Entry
PSTAA_2881 CDS
T01976
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psr
Stutzerimonas stutzeri DSM 4166
Pathway
psr03410
Base excision repair
psr03430
Mismatch repair
psr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSTAA_2881 (recJ)
03430 Mismatch repair
PSTAA_2881 (recJ)
03440 Homologous recombination
PSTAA_2881 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psr03400
]
PSTAA_2881 (recJ)
DNA repair and recombination proteins [BR:
psr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PSTAA_2881 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSTAA_2881 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSTAA_2881 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AEA84760
LinkDB
All DBs
Position
complement(3072924..3074639)
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AA seq
571 aa
AA seq
DB search
MRIEPRPLPEQLPDLGELPPLLQRLYAARGVTCAEELDKGLARLIPYKQLKCIDAAVELL
VEALEKRQRILFVGDFDADGATASSVGVLGLRQLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQREPDLLVTVDNGISSVDGVAAAKAAGLKVLVTDHHLPGHELPAADAIVNPNQPECAF
PSKCIAGVGVIFYVLLALRARLRELDWFVRQGWAEPNLAELLDLVALGSVADVVPLDANN
RILVHQGLARIRAGRARPGLRAILEVAGRDHRRITSTDLGFILGPRLNAAGRLDDMSLGI
ECLLCEDEALARDMATQLDELNKDRKAIEQGMQREALAQLKDLPLEDLPFGLCLFEPDWH
QGVIGILASRLKERYHRPTIAFADAGDGLLKGSARSVPGFHIRDALDAVAARHPGLISKF
GGHAMAAGLSLPQANFGAFAAAFDAEVRRQLCEDDLTGRLLTDGQLSVEEFHLELARALR
NAGPWGQHFPEPMFHGVFQLMQQRIVGERHLKLVLKSECGSLTLDGIAFNVDREIWPNPT
VRWAELAYKLDVNEYRGQESVQLMVAHIAPR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccccgccccctgcccgagcagctgcccgacctcggcgagctgccgccg
ctgctgcagcgcctctacgcggcccgtggcgtgacctgcgcagaggagctggacaagggg
ctggcgcggttgattccttataagcagctcaagtgcattgatgcggcggtcgagctgctg
gtcgaggcgctggagaagcgtcagcgcatcctgttcgtcggcgacttcgatgccgacggc
gccaccgcgagcagcgtcggcgtgctcggcctgcgtcagctgggggcggcgcatgtcgat
tatctggtgcccaatcgcttcgaatacggctacgggctgacgcccgaaatcgttgccgtc
gccttgcagcgcgagcccgatctgctggtgaccgtggacaacgggatttccagcgtggac
ggtgtggcggcggccaaggcggcggggctgaaggtgctggtgaccgaccatcacctgccg
ggccacgaactgccggcggctgatgccatcgtcaatcccaatcagcctgagtgcgccttt
ccgagcaagtgcatcgccggggtcggcgtcatcttctatgtgctgctggcgttgcgcgct
cggctgcgtgagctggactggttcgtccgtcagggctgggccgagccgaacctggccgag
ctgctcgatctggtggcgctgggcagtgtcgccgacgtggtgccgctggacgccaacaac
cgcattctggtccaccagggcctggcgcgaattcgcgcggggcgggctcggccggggctg
cgggcgattctcgaggtggccgggcgcgatcatcggcgcatcacctccaccgaccttggc
ttcattctcggcccgcgattgaacgcggccgggcggctggatgacatgtcgctgggtatc
gagtgcctgctctgcgaggacgaggcgctggcgcgcgacatggcgacccagctcgacgag
ctgaacaaggatcgcaaggccatcgaacagggcatgcaacgcgaggcgctggcgcagctc
aaggatctgccactggaggacctgccgttcggcctgtgcctgttcgagccggactggcac
cagggcgtgatcggcatcctcgcctcgcgcctcaaggagcgctaccaccgtccgaccatc
gccttcgccgatgcaggcgacgggctgctcaaagggtcggcgcgctcggtgccaggcttt
catatccgcgatgcgctggacgcggttgccgccaggcatcccggcctgatcagcaagttc
ggcgggcacgccatggcggccgggctgtcgctgccacaagcgaacttcggtgccttcgcc
gcggccttcgatgccgaagtgcgccgccagctgtgcgaggacgatctcaccggtcggcta
ctcaccgacggccagctcagcgtcgaggaattccatctggagttggcgcgtgcgctgcgc
aacgccgggccctggggccagcattttcccgagccgatgttccatggcgtgttccagttg
atgcagcaacgtatcgtcggcgagcgccatctcaagcttgtgctcaagagcgaatgcgga
tcgctgacgctggacggcatcgccttcaacgtcgaccgcgagatctggccgaacccgacg
gtgcgctgggcggagctggcctacaaactggacgtcaacgagtatcgcggccaggaaagc
gtgcagctgatggtggcgcatatcgccccgcgctga
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