Stutzerimonas stutzeri DSM 4166: PSTAA_3401
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Entry
PSTAA_3401 CDS
T01976
Name
(GenBank) Transcriptional regulator, LysR family
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
psr
Stutzerimonas stutzeri DSM 4166
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psr03000
]
PSTAA_3401
Transcription factors [BR:
psr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSTAA_3401
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
HTH_20
HTH_24
HTH_AsnC-type
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AEA85267
LinkDB
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Position
complement(3596819..3597745)
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AA seq
308 aa
AA seq
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MDISFRQLQAFVLIAEHRSFSRAAEQVHLSQPALSYSLRKLEDALGLSLLARNTRSVELT
AAGLRFLEQARRLLRDMDNAVHDAHEQLHLESGSLRIAVLPSVAIEPLPRVLQEYRRRYP
GIDISLHDGRAGEIRQWVSAAEVDFAITSAVDDLGALDFQPLYDDSLVLLVRGHERLRGK
ALLAALREQDYIATTRDTSLRSMADETLQRMGLLREPAWEVAYMSSAAALARAGLGFALL
PASVADTFNSDGSLAVHQLDEAPARSIGLLQRKPCYLSPPAQVFVALLQQQVGGALGTTT
ESRDDFAS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggacatcagctttcgccagcttcaggccttcgtcctgattgccgaacaccgcagtttc
agtcgcgccgccgagcaggttcacctgtcgcagccggcactcagctacagcctgcgcaaa
ctcgaagacgccctcggcttgtcgctgctggcgcgcaacacgcgcagcgtggagctgacc
gccgccggcctgcgttttctcgagcaggctcgccgcctgctgcgtgacatggacaacgcc
gtgcacgacgcgcatgagcaactgcatctggagagtggttcgctgcgcatcgctgtgttg
ccgtcggtggccatcgagcccctgccacgggtgctgcaggaataccggcggcgctatccc
ggtatcgacatcagcctgcatgacggccgcgccggggaaatccgccagtgggtgagtgcg
gccgaggtggatttcgccatcacctcggcggtcgatgacctcggcgcgctggatttccag
ccgctgtacgacgacagcctggtattgctggtacgcggccacgaacgcctgcgcggcaag
gctttgctcgctgcgctacgtgaacaggactacatcgccaccacccgcgataccagcctg
cgcagcatggccgatgaaacactgcagcgcatggggctgttgcgtgaaccagcgtgggaa
gtggcgtacatgagcagcgccgccgcgctggcgcgtgcgggcttgggcttcgccctgttg
ccggccagcgtggccgacaccttcaacagcgacggcagcctcgccgtgcaccagctcgac
gaggcgccggcgcgcagcatcggcctgctgcagcgcaagccgtgctacctgagcccgccg
gcgcaggtcttcgtcgcgctgttgcaacagcaggtcggtggggctctcggcacgactacc
gagtcacgcgacgatttcgcctcctga
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