Stutzerimonas stutzeri DSM 4166: PSTAA_3876
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Entry
PSTAA_3876 CDS
T01976
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psr
Stutzerimonas stutzeri DSM 4166
Pathway
psr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PSTAA_3876 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psr03019
]
PSTAA_3876 (orn)
03009 Ribosome biogenesis [BR:
psr03009
]
PSTAA_3876 (orn)
Messenger RNA biogenesis [BR:
psr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSTAA_3876 (orn)
Ribosome biogenesis [BR:
psr03009
]
Eukaryotic type
Pre-60S particles
RNases
PSTAA_3876 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEA85732
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All DBs
Position
complement(4142747..4143289)
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLDPDNDVIIEMATIVTDSQLNVLAEGPVIAVHQSDEVLARMDEW
NTRQHGGSGLTQRVRESRISTAEAERLTLEFLEQWVPKGKSPICGNSICQDRRFLYRQMP
TLEAYFHYRNLDVSTLKELAARWAPQIMEGFKKGGTHLALDDIRDSIAELRHYREHFIKV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccgcagaacctgatctggatcgacctggaaatgaccggtctggatccggac
aacgacgtcatcatcgagatggccaccatcgtcaccgacagccagctcaacgtgctggcc
gagggaccggtcatcgccgtgcaccagagcgacgaagtcctcgcccgcatggatgagtgg
aacactcgccagcacggcggttcggggctgacccagcgtgtgcgcgagagccggatttcc
acggcggaggccgagcgcctgaccctggaattccttgagcagtgggtgcccaagggcaag
tcgccgatctgtggtaacagcatctgccaggaccgtcgtttcctctaccggcagatgccg
acgctggaagcctacttccactaccgtaatctggatgtctcgacgctcaaggaactggca
gcacgctgggcgccgcagatcatggaaggtttcaagaagggcggtacccacctggcgctg
gacgacatccgcgactccatcgccgagctgcgtcattaccgcgagcatttcatcaaggtc
tga
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