Pseudoalteromonas sp. R3: ELR70_07920
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Entry
ELR70_07920 CDS
T10968
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psrr Pseudoalteromonas sp. R3
Pathway
psrr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psrr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ELR70_07920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psrr03021
]
ELR70_07920
Transcription machinery [BR:
psrr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ELR70_07920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
DUF2774
Motif
Other DBs
NCBI-ProteinID:
AZZ97080
LinkDB
All DBs
Position
1:682290..682763
Genome browser
AA seq
157 aa
AA seq
DB search
MPGALCVAGKVGFAPYPKLGDAQDVAQDTFVKLLGRPEKLENIKSTKAWLAKIADNLVID
KVRREILEKNYLTMLASMPEAQTPSAEQKWETLELLEQVDRLLNGLKPKEKLAFLMVRLE
GMAYKEVAAQLEVSLSSAEKYVAKAMMACYVNMYGLD
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
ataccaggcgcattatgcgtggctggtaaagtgggtttcgcgccgtacccaaaactgggg
gatgcccaggatgtcgcgcaggatacctttgtaaaattactgggtcgtccagagaaactg
gaaaacataaaaagtactaaggcctggcttgcaaaaattgccgataatctggtgatcgac
aaagtgcgccgtgagatcctggaaaaaaactatctgaccatgctggcaagcatgcctgag
gcgcaaacgccctcagccgaacagaagtgggaaacactggagttactagagcaggtagac
cgattattgaatggtctcaagccaaaagaaaagctggcttttttgatggtccgtctggaa
ggcatggcgtataaagaagtggcagctcaactggaagtgagcttgtcttcagctgaaaag
tatgtggctaaggcaatgatggcttgctatgtcaacatgtatggcctggactga
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