Pseudoalteromonas sp. R3: ELR70_09180
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Entry
ELR70_09180 CDS
T10968
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
psrr Pseudoalteromonas sp. R3
Pathway
psrr00541
Biosynthesis of various nucleotide sugars
psrr01100
Metabolic pathways
psrr01250
Biosynthesis of nucleotide sugars
Module
psrr_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
psrr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ELR70_09180 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psrr01005
]
ELR70_09180 (kdsA)
Enzymes [BR:
psrr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
ELR70_09180 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
psrr01005
]
Lipid A
ELR70_09180 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF7526
Motif
Other DBs
NCBI-ProteinID:
AZZ97291
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Position
1:961472..962326
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AA seq
284 aa
AA seq
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MNTQIIKVADIEVANDKPFVLFGGMNVLESRDLAMRIAEHYVEVTSKLGIPYVFKASFDK
ANRSSINSYRGPGMEEGLKIFEEIKNTFNVPLITDVHEPHQAAPVAEVVDVIQLPAFLAR
QTDLVVAMAKTGNVINVKKPQFLAPHEMRHIIKKMSEAGNEQVILCERGTSFGYNNLVVD
MLGMDDMKHMAPVIFDATHALQRPGGRSDSADGRRAQAAELARSGMALGLAGLFIEAHPN
PNEAKCDGPCALPLAKLEGYLQQMKAVDDLVKSFAPLDTSAADL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacagattatcaaagtagcagacatcgaggttgcaaacgacaaacctttcgtg
ctgtttggtggcatgaatgtgcttgaatcacgtgacctggcaatgcgcattgccgagcac
tatgttgaagtgaccagcaaactgggcatcccctatgtgtttaaggcatcgttcgataaa
gccaaccgctcttctatcaactcataccgcggtccgggtatggaagaggggcttaaaatc
tttgaagaaatcaaaaatacctttaacgtgccgctgatcactgacgttcatgagcctcat
caggcggcaccggttgccgaagtggttgatgtgatccagttgccagcctttttggcgcgt
caaactgatttggttgtggctatggctaagaccggcaatgtcatcaatgtaaaaaaacct
cagttcttggcgccgcatgagatgcgtcacatcatcaaaaagatgagcgaggcgggcaac
gaacaagtgatcttgtgtgaacgcggcaccagctttggttataacaacctggtagtcgat
atgctgggcatggatgacatgaagcatatggcgccggtgatcttcgatgccacacacgct
ctgcagcgcccgggcggtcgcagtgattcggccgatggtcgtcgtgcacaggcggctgag
ctggcacgcagcggtatggcgttgggtctggcaggcttatttattgaagcacaccccaat
ccaaacgaagccaaatgtgatggtccgtgtgcactgccgctggcgaagctggaagggtat
ttgcagcagatgaaagccgtggacgatctggtaaagagttttgctccgctggataccagc
gctgctgatctctaa
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