Pseudoalteromonas sp. R3: ELR70_09680
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Entry
ELR70_09680 CDS
T10968
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
psrr Pseudoalteromonas sp. R3
Pathway
psrr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELR70_09680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psrr03019
]
ELR70_09680
Messenger RNA biogenesis [BR:
psrr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ELR70_09680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Tautomerase_2
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QAA00034
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All DBs
Position
1:1060388..1060906
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AA seq
172 aa
AA seq
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MIDAEGFRANVGIVICNNQGQVFWARRYGQHSWQFPQGGVDEGETPEQTMYRELHEEVGL
RPEDVEIVASSKHWLRYKLPKRLIRKDSSPVCIGQKQKWFLLKLKCKDEDVDLMRTHHPE
FDDWRWVSYWYPVRQVVSFKRDVYRRVMKEFAPFAMPFNRKEHSHKDHWRRR
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgccgaaggatttcgtgccaatgtaggtattgttatttgtaacaatcagggg
caggtattttgggcgcgccgctatggtcagcattcatggcagtttccgcaaggtggtgtg
gatgaaggagaaacgccagaacaaaccatgtaccgagaactgcatgaagaagttggattg
cggccggaagatgtagaaatcgttgcaagctcaaaacattggttacgctataaattgcca
aagcgactgatccgcaaagattcaagcccagtctgtattggccaaaagcaaaagtggttt
ctactgaaactcaagtgcaaagatgaagatgtagacttaatgcggactcatcaccccgaa
tttgatgattggcgctgggtaagttattggtacccggtacgtcaggtggtctcatttaaa
cgcgatgtgtatcgccgggtaatgaaagagtttgcgccgtttgcaatgccgttcaaccgc
aaagagcattcgcataaagatcactggcgacgccgttaa
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