Pseudoalteromonas sp. R3: ELR70_11580
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Entry
ELR70_11580 CDS
T10968
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
psrr Pseudoalteromonas sp. R3
Pathway
psrr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psrr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ELR70_11580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psrr03019
]
ELR70_11580
03009 Ribosome biogenesis [BR:
psrr03009
]
ELR70_11580
03036 Chromosome and associated proteins [BR:
psrr03036
]
ELR70_11580
Enzymes [BR:
psrr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ELR70_11580
Messenger RNA biogenesis [BR:
psrr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ELR70_11580
Ribosome biogenesis [BR:
psrr03009
]
Eukaryotic type
90S particles
RNase
ELR70_11580
Prokaryotic type
rRNA processing factors
ELR70_11580
Chromosome and associated proteins [BR:
psrr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ELR70_11580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AZZ97707
LinkDB
All DBs
Position
1:1553663..1554340
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AA seq
225 aa
AA seq
DB search
MKKNVTELYKKIGYEFSDQSLLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYKQFP
KAREGDLSRMRSTLVRGQTLAEFGVEFGLGDYLRLGPGELKSGGYRRESTLADAVEAIIG
AVFLDSDIETCKTLVLKWYDTRLAAISPGHNQKDPKTLLQEYLQARKLPLPGYTVIDTKG
QAHNQTFTVECIVEGMESIISVGSSRRKAEQKAAEKALKILKNDS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacgtcacagaattatataaaaagattggttacgaattttccgatcaaagc
ctgcttgagcaggcaatgacacatcgtagccacaaagggcagcacaatgaacgtctggag
tttttaggcgactcaatcctgagctttgttattgccaatgccttgtataagcagtttcct
aaagcgcgtgaaggtgatcttagccggatgcgttctacgctggtacgaggacagactctg
gcagagttcggtgttgagtttggcttaggtgactatctcagattaggtccaggtgaattg
aaaagcggtggttatcgtcgtgagtcaaccctggcagatgcggtcgaagcgattattggc
gcggtgtttttagattcagacatcgagacctgtaagacgctggtattaaaatggtacgac
acgcgtttggctgcgatttctcctggtcacaaccagaaagacccaaaaaccctgttgcaa
gagtacttgcaggcacgcaaattgcccttacccggttatactgtaatagataccaaggga
caggcacacaatcagacctttacggttgagtgtattgtggaagggatggaaagtattatc
tcagtaggcagctctcgtcgtaaggctgagcaaaaagccgctgaaaaagcactaaagatt
ttaaagaatgactcctaa
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