Pseudoalteromonas sp. R3: ELR70_18375
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Entry
ELR70_18375 CDS
T10968
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psrr Pseudoalteromonas sp. R3
Pathway
psrr03030
DNA replication
psrr03430
Mismatch repair
psrr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ELR70_18375
03430 Mismatch repair
ELR70_18375
03440 Homologous recombination
ELR70_18375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psrr03032
]
ELR70_18375
03400 DNA repair and recombination proteins [BR:
psrr03400
]
ELR70_18375
Enzymes [BR:
psrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ELR70_18375
DNA replication proteins [BR:
psrr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ELR70_18375
DNA repair and recombination proteins [BR:
psrr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ELR70_18375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
AZZ98893
LinkDB
All DBs
Position
1:complement(3038817..3042308)
Genome browser
AA seq
1163 aa
AA seq
DB search
MAVPEFVHLRVHSDFSMVDGLAKTKPIVARAAELGMPAFAITDQMNLCGLVRFYGAAHGA
GIKPLVGADFWLKSDQFPDEPSRIVILAKNNEGYKNLTLLISEAYLRGHVFHRPVIDKAW
LAKYKEGLILLSGAKDGDVGKALLKGNPQVVAETVEFYETHFRDHYFLELHRTGREQEEE
YLHAAIALATERGLPVVATNEVVFLHEHDFEPHEIRVAIHDGYTLEDKNRPRRFSKEQYL
KTPEQMQELFSDIPEALQNTVEIAKRCNVTVQLGTYFLPDYPTGDLKIEDFLVKVSRDGL
EERLQFLFPDDAERAEKRGPYDERLQIELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSK
LYGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPGDPGMTLAKAFEVEPR
LPEVYDGDEEVRELIDKCRILEGCTRNAGKHAGGVVISPTSITDFAALYCDEEGKFPVTQ
FDKNDVETAGLVKFDFLGLRTLTILQWALDMTNERLAREGIEPVDIAAIPLDDPASFEVL
LRAETTAVFQLESRGMKDLIRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDAQYQHESLQPILEPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEM
AKQRSTFEDGAKDNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHYPA
EFMAAVMSADMDNTDKIVTLVDECENMKLTLLPPDVNAGVYKFAVNRQGEIVYGIGAIKG
VGEGPVEAILEAREQGGPFKDLFDFCARVDLKRLNRRVIEKLIYAGALDLLGPEKTQPGR
ATLLASLKDAMKSAEQHHKAESLGQSDLFGLLAVEPDDVEQAFVKALPLSDDEWLQGEKD
TLGLYLTGHPINQYRKELKNYTSGRLVELQPTNRDVQSTAAGLVINARVLINKKGKRWGL
ITLDDKSARIDVRLFPEQFEMYQDMLQMNQILVISGQVSFDNFSGGITMTAREVCTIAQA
REKRISAIKMTLNMVQIDANFIDNLKKVLEPYKFGTCPVKIQYQRPDAIAEVTLGMQWCV
TPSDDLLRRLSKMAAQEIELEFN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggcagtacctgagtttgttcatttaagagtacacagcgacttctctatggtcgacggg
ctggctaagactaagcccatagtggcgcgtgccgctgagctgggcatgcccgcatttgcg
ataacggatcagatgaacctgtgtggcctggtgcggttttatggcgcagcgcacggcgcg
ggtattaaaccgctggttggtgccgacttttggctcaagagcgatcaattcccggatgag
cccagccgtattgtgatactggcaaaaaacaacgaaggctacaaaaatctcacgctgttg
atttccgaggcctatttacgtggccacgtgtttcaccggcccgtgatagacaaagcgtgg
cttgccaaatataaagaaggcctgatcttactttccggtgccaaagatggtgatgtcggt
aaagcactactcaagggcaacccgcaggttgtcgccgagaccgtagagttttacgaaact
cattttagagatcattattttctggagctgcatcgcacgggtcgtgagcaggaagaagag
tacctgcacgctgccatcgcgctggcaacagaaagagggttgccggtcgttgcaacaaac
gaagtggtatttctccatgaacacgacttcgaaccccacgaaattcgtgtggccatccac
gacggctacacactggaagataagaaccgccccagacgtttctccaaagagcagtatctt
aaaacccctgaacaaatgcaggagttattcagtgatattccggaagcgttgcaaaacacg
gtagagattgccaagcgctgtaacgtcaccgttcagctgggcacttacttcctgccagat
tatccgaccggcgatttaaaaatcgaagacttcttggtgaaggtctcccgtgatggtctg
gaagagcgtttacagttcttattcccggacgatgccgagcgtgcagagaaacgtggtcct
tatgatgaacgtctgcaaattgagctcgatgtaatcaaccagatggggttcccgggctac
ttcctgatcgtaatggagttcattcagtggagtaaggataacgatattccggtagggccg
ggtcggggctccggtgccggctcactggtggcctatgcattaaaaattaccgatctggac
ccactggaattcgatctgctattcgaacgtttccttaacccagaaagggtctcgatgccc
gacttcgacgtcgacttctgtatggatcgccgggatgaagtaatcgaccacgtatctaag
ctgtacggccgtcaggcggtttcccagatcattacctttggtaccatggcggctaaagcg
gtaattcgagacgtcggccgggtgcttggtcacccttatggtttcgtagaccgtatttct
aagcttgtcccaggcgacccgggtatgacactggccaaagcattcgaggtggagccgcgc
ttgccagaagtgtacgacggtgacgaagaagtgcgtgagctgatcgacaagtgtcgtatt
cttgaagggtgtacgcgtaacgccggtaagcacgccgggggcgtggtaatctcgcccacc
agtattaccgactttgccgcgctgtattgtgacgaagaaggtaagttcccggttacccag
tttgataaaaacgacgtagaaactgcgggtttggtaaagtttgacttcctcggtctgcgt
accttaaccatcttgcagtgggcgttggacatgaccaacgagcggctggcgcgagagggt
attgagccggtggatattgccgccattccgttagacgacccggccagtttcgaagtgctg
ctcagagccgaaaccaccgccgtgttccagctggaatcgcgcgggatgaaagacttgatc
cgtcgtcttaagccggactgcttcgaagacatgatcgcactggtagctctgttccgtccg
gggccgctgcaatcgggcatggtagataactttatcgaccgtaagcatggtcgcgaagag
atctcgtacccggatgcacaataccagcatgagagtctgcaaccgatcctggagcccact
tacgggatcatcctgtatcaggagcaggtaatgcagatagcccaggttctggcgggatac
agcctgggtggcgcagacttgctgcgtcgagctatgggtaagaaaaagcccgaggaaatg
gccaaacagcgcagcaccttcgaagacggtgctaaagacaacggcgttgacggcgaactt
gctatgaagatcttcgatcttgtagagaagttcgcaggttacggctttaacaaatctcac
tccgcagcttatgcactggtgtcataccagacactgtggatgaaaacccattatccggcc
gagtttatggcagcagtaatgtcggcggatatggataacaccgataaaatcgttaccctg
gtagatgaatgcgaaaacatgaagttgacgctgctgccaccggatgttaacgctggcgtg
tacaagtttgcggtaaaccgccagggcgaaatcgtctatggtatcggtgccatcaaaggc
gtgggtgaaggcccggttgaagctatccttgaggctcgtgagcagggcggcccgttcaag
gatttattcgatttttgtgcccgggttgacctgaaacgcctcaaccgccgggtgattgaa
aaactgatctacgcgggtgcactagacctgctgggccccgagaaaacccagccagggcgt
gctaccttattggccagcctgaaagacgccatgaagtctgccgagcagcaccacaaggca
gagtcattgggacaaagcgatttgtttggcttgctggctgtggagccagacgacgttgag
caggcatttgttaaagcccttccactatcggatgacgagtggttgcagggcgaaaaagac
acgttaggcttgtatctgaccggtcaccccataaatcagtacagaaaagagttaaaaaat
tacacctcgggtcgtctagtagaattacagccgacgaatcgcgatgtgcaatcgacggct
gctggtttggttatcaatgcgagggtgctgatcaataaaaagggcaaacgctggggtctg
ataactttagatgacaagagcgcacgaattgatgtacgcttattccctgaacagtttgaa
atgtaccaagatatgctgcaaatgaaccaaatcttggtaatatccggacaggtcagcttt
gataacttctccggcggcattacaatgaccgccagagaagtctgcaccatagctcaggcc
cgtgaaaagcggatcagtgcgataaaaatgacattgaatatggtgcaaattgacgcgaat
ttcatcgataatctgaaaaaagtactggaaccgtataaattcggtacgtgtccggtaaaa
atccaatatcagcgcccggacgcgatagcggaagtgacattaggtatgcaatggtgtgtg
acgcccagtgatgatctcctcagacggttatccaagatggcggcgcaggaaatagaacta
gaatttaattaa
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