Pseudoalteromonas sp. R3: ELR70_19110
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Entry
ELR70_19110 CDS
T10968
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psrr Pseudoalteromonas sp. R3
Brite
KEGG Orthology (KO) [BR:
psrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psrr03016
]
ELR70_19110 (truB)
Enzymes [BR:
psrr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ELR70_19110 (truB)
Transfer RNA biogenesis [BR:
psrr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ELR70_19110 (truB)
Prokaryotic type
ELR70_19110 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
SutA-RBD
Methyltranf_PUA
Motif
Other DBs
NCBI-ProteinID:
AZZ99024
LinkDB
All DBs
Position
1:complement(3197628..3198563)
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AA seq
311 aa
AA seq
DB search
MARRSKGRPIDGIVLLNKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEVVETRPVQITREQLEQDVASFLGESDQ
YPSMYSALKYQGQPLYKYAREGIEVPRKCRKINVYSISLDEYDEQAQEIQMTVHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSEVGHYPSDKMITLEELEEKLQQAKAEDLPPSTYIDA
LLLPMDTALVDLPAVEISAEQGVAFSHGQTVVVGELPEGVLKVVADGRFVGIGERNQHGH
LKAKRALSSAQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgtagtaaaggccgtccaatagacgggattgtgttgcttaacaagccgcag
gggatctcctccaataaagccttgcaacaagccaaaggcatttactttgcgcaaaaagcg
ggtcacacaggggcgctcgatccgctggcaacgggcatgctgccaatctgctttggtgaa
gcaactaagtttacccagttcctgctggacacagataaaacgtacgtggtaagagccaag
ctaggcgaacgtaccacgacatcagattctgatggcgaagtggttgaaacacgtccggta
caaattactcgcgagcagctagagcaggacgtcgccagttttctgggtgagtcggatcaa
tatccgtccatgtattcggcgctaaagtatcagggtcaacctttatacaagtacgctcgt
gagggcatcgaagtgccgcgcaagtgtcgtaagatcaacgtttattcgatcagcttggat
gaatacgacgagcaggcgcaagagatccagatgacagtgcatgtctcaaaagggacttac
attcgtaccatagtggatgacttgggcgagaagcttggctgtggggcgcatgtcattatg
ctgcatcgctctgaagtgggccattatccgagtgataaaatgattacgctggaagagctt
gaagaaaaacttcagcaggccaaagcggaagatttgccgccgtcgacttacatcgatgcg
ttgttactcccgatggacacggcgctggttgatttaccggcggtagagatcagtgcggag
cagggagtggcattcagccacggtcagaccgtggtggttggtgagctgccagagggcgta
ctgaaagtcgtggctgatggtcgttttgtcggtattggtgagcgcaaccagcacggccat
ttaaaggccaagcgggccttatccagcgcacaataa
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