Pseudoalteromonas sp. R3: ELR70_21655
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Entry
ELR70_21655 CDS
T10968
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psrr Pseudoalteromonas sp. R3
Brite
KEGG Orthology (KO) [BR:
psrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psrr03016
]
ELR70_21655 (truD)
Enzymes [BR:
psrr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ELR70_21655 (truD)
Transfer RNA biogenesis [BR:
psrr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ELR70_21655 (truD)
Prokaryotic type
ELR70_21655 (truD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AZZ99455
UniProt:
A0A3S5I5W7
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All DBs
Position
1:complement(3782187..3783251)
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AA seq
354 aa
AA seq
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MKTCVSELNYLYGKPQARAEFKSQPEDFMVDEILDIEFTGEGEHVCLQIVKKGENTAFIA
RKLAEFAGVAPRDVSYGGLKDRHGVCTQWFSVPVPIKQSLDFSKLNCDSLFVLKQVRHNR
KLRTGCHKGNRFTITLRNVSEPLDLLSRVNAVRQGVPNYFGEQRFGHDGYNLEMAQRLFE
GERIRDKKLRGLVISAARSHIFNQLVSRRVAEHGLAKTWHREVFMLSGSNAFFEEDISDE
LIVRLLEEDIVLSAPLLGKGEKGLTALEVEWLKPFADWWQGLGSLGLKNERRALRVIPGN
LLVKSLEATTIQLSFDLPKGCYATAILRELVHHEDVSHRNYDKKGNNQDEDTAQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacctgtgtatctgagctcaattacttgtatggtaaaccacaagcgcgtgctgaa
tttaaatctcagcctgaagactttatggttgatgaaatcctcgacattgaatttaccggg
gaaggggagcatgtttgcctgcagatagttaaaaaaggtgagaacaccgcctttattgct
cgcaaactggctgaatttgccggtgtcgcgccaagagatgtcagctacggtggactcaaa
gatcgccatggtgtctgtactcagtggtttagcgtaccggtgccaatcaagcagtcactg
gatttcagtaagctcaactgtgacagtctgtttgtgcttaagcaagttcgtcataaccga
aagttacgcaccggatgtcacaaaggtaatcgttttaccatcacgctacgtaatgtcagt
gaaccactggatctgttgtcacgcgttaacgcggtgcgtcagggcgtgcccaactatttt
ggtgagcaacgctttggtcatgatgggtataacctggaaatggcgcaaagactgtttgaa
ggagagcggatccgtgataaaaaattacgaggtctggtgatctctgcggcgcgctcacat
atttttaatcagctggtctctcggcgggttgctgagcatggcctggcaaaaacctggcat
cgtgaagtgtttatgctcagtggcagcaacgcgttttttgaagaagacatcagtgatgag
ctgatagttcggctgcttgaagaggatatcgtgttgtctgctcctttgctgggtaaaggc
gaaaaaggccttaccgcactagaggtagagtggctcaaaccctttgccgactggtggcag
ggactaggctccttagggcttaaaaacgagcgcagggcacttcgggtgatacccggaaat
ctgctggtaaagtccctggaggcaacaacaattcagcttagttttgatttacctaaaggg
tgttatgccaccgcgatactgcgtgagctggtgcatcatgaagatgtcagccatcgcaac
tacgataaaaaaggaaacaaccaagatgaagatactgctcagtaa
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