Pseudoalteromonas sp. R3: ELR70_21890
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Entry
ELR70_21890 CDS
T10968
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psrr Pseudoalteromonas sp. R3
Pathway
psrr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELR70_21890 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psrr03019
]
ELR70_21890 (pcnB)
Enzymes [BR:
psrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ELR70_21890 (pcnB)
Messenger RNA biogenesis [BR:
psrr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ELR70_21890 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AZZ99488
UniProt:
A0A3S5I5Y7
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All DBs
Position
1:3831741..3833072
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AA seq
443 aa
AA seq
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MTCSATPALIPRSEHAISRKQFSPNAIKVLYRLKDGGYDAYLVGGCIRDILLGIEPKDFD
VVTNATPEQVKKLFRNCRLIGRRFRLAHIVFGREIIEVATMRGHHQAQDNPDPTSQSSEQ
GQLLRDNVYGTIEEDAQRRDFSINALYYSINDFSIRDFAGGIAAIEQRKIELIGDPETRY
REDPVRMLRAVRFATKLDMTIAGPTEAPIKELAPLLSNIPPARLFEETLKLFLGGKAEAN
FLMLRKYGLFKQLFPAVDAILDNADSEFESTFIQKMFANTDERINADKKVTPAFIYAALL
WFPLRDRCNALIAEGMNEYDAFMQAISQILAENARHIAVPKRFTLGARDIWHIQQRLDKR
GGQRAYRLSLQPRFKAGYDFLLLRVESGETEQQELAHWWTDYLQQDVNGQKEMVKALGQR
SGGSERRRRRPRNKPRRKPNPES
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgacatgtagtgctacacctgcgttaataccacgcagtgaacatgctatctcgcgcaaa
caatttagccccaatgcaatcaaagttttgtaccgactcaaagatggtggctatgacgcc
tatctggtgggtggttgtattcgtgatatcttgttaggcattgaacccaaagattttgat
gttgttactaatgcgacacctgagcaagtcaaaaagctatttcgtaattgccggctaatc
ggccgccgcttcagactcgcccatatcgtgtttggccgtgaaatcatagaagtggcaacc
atgcgtggacaccaccaggcacaagacaacccggatccaaccagtcagtctagtgaacag
ggccagctgctgcgcgataatgtctatggcacgattgaagaagatgcacagcgccgtgat
ttttcgattaatgcgctctactactcgattaacgactttagtatccgtgactttgcgggc
ggtattgcggccattgagcagcgtaaaattgaactgatcggcgaccctgaaacccgctat
cgggaagatccggtacgtatgctgcgtgccgtgcgcttcgctactaagctagatatgacc
attgccggcccaacggaagcgccaattaaagaacttgcgcctctactaagcaatatccct
ccggcacgcttgtttgaagaaacattgaagctctttttaggtggtaaggcggaagctaac
ttcctgatgctcagaaagtatggcctgtttaaacaacttttcccggccgttgacgctatt
ttagacaatgcagacagcgagtttgaaagcacgtttatccaaaaaatgttcgctaatacg
gatgagcgcattaacgccgataaaaaagtcactccagcctttatctatgctgcactgcta
tggttcccgctgagagaccggtgtaatgcactgatagctgagggcatgaacgagtatgac
gcctttatgcaagcgatcagtcagatactggcagaaaacgcccgtcacattgccgtgcca
aaacgctttacactcggtgcgcgggatatctggcacatccaacagcgtctcgataaacgc
ggtggtcagcgcgcttaccgtctcagcctgcaaccgagatttaaagccggttatgacttc
ttacttttacgagtagaaagtggcgaaaccgagcagcaggagctggcacactggtggact
gactatttgcaacaagacgtcaatggacaaaaagagatggtgaaagcgctgggtcaacgc
tctggtggctcagaaagacgccgccgtcgtcccagaaataaaccgcgtagaaaaccaaac
ccagaatcatga
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