Pseudomonas sp. RU47: CCX46_01195
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Entry
CCX46_01195 CDS
T11150
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
psru Pseudomonas sp. RU47
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psru03000
]
CCX46_01195
Transcription factors [BR:
psru03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CCX46_01195
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_31
HTH_3
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
AZZ73803
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Position
complement(274286..275323)
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AA seq
345 aa
AA seq
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MSEEKPRKRRGAGRVTLNAVARAAGVSAITVSRYFNQPEQVSPERRKRIAAVVAELGYVP
NLVAGGLASARGKIVGMVIPNISGPIFANTIQGFSDTLSRHGYQLLLASSYFSTEQEENA
VRAFLGWSPAALVLTSHFHSAGTEKMIAEADVPVIETWDYQPDREPMQIGFSHFEVGVTA
ARYLLEKGYQRIAFVQNSAAGDFSALERRDGYAATLRESGLEPWVYAPDADRAPFEAGKQ
AMDALMNASPRPDAIIFANDNLAAGGLLAGQRAGLKIPEECAVLGFGDYPFAEMLLPSLS
TIKPPALEIGVLAATRVLESLGVLPSDEVQRLNLLQCQVIEREST
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagaaaaaccccgcaaacgccgtggcgccggacgcgtgaccctgaatgccgtc
gcgcgcgcggccggagtttcagcgatcaccgtgtcgcgctacttcaaccagccggagcag
gtttcgcccgagcgtcgcaagcggattgcagcggtagtagccgagttgggctatgtaccg
aatctggtggccggcgggctggcctcggcgcggggaaaaatcgttggtatggtcatcccg
aacatctccgggccgatcttcgccaataccattcaaggcttcagcgacacgctcagccgt
cacggttatcaactgttgctggcgtcgagttacttcagcaccgagcaggaagaaaatgcg
gtgcgcgcgtttctcggctggtcgccggcggcgctggtgctcaccagtcactttcacagt
gccggcacggaaaagatgatcgccgaggccgatgtgccggtgatcgagacgtgggattac
caaccggatcgtgagccgatgcagatcggtttttcgcatttcgaggtgggcgtgacagcc
gccagatatctgctggaaaaaggctaccaacgtatcgctttcgtgcagaacagcgctgcg
ggcgacttcagcgcattggaacgccgcgatggttacgcggcgaccttgcgcgaatccggc
ctggaaccttgggtctacgcccctgacgctgatcgcgcaccattcgaggccggcaaacag
gcgatggacgccctgatgaacgcctcaccgcgccccgacgcgatcatcttcgccaacgac
aacctcgccgccggcggcttgcttgccgggcaacgcgcgggtttgaaaatccccgaagaa
tgcgccgttcttggctttggcgactacccgttcgccgagatgcttttgccgagcctcagc
acgatcaaaccaccggcgctggagatcggtgtactcgccgcaacacgcgtgctggaaagc
cttggcgtgttgccgagcgacgaagtgcaacgtctgaacctgctgcagtgccaagtcatc
gaacgggaaagcacctga
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