Pseudomonas sp. RU47: CCX46_02405
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Entry
CCX46_02405 CDS
T11150
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CCX46_02405 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psru02000
]
CCX46_02405 (msbA)
Enzymes [BR:
psru01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CCX46_02405 (msbA)
Transporters [BR:
psru02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CCX46_02405 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_22
AAA_16
AAA_29
ABC_ATPase
nSTAND1
RsgA_GTPase
NB-ARC
AAA_24
nSTAND3
AAA_25
AAA_30
NACHT
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
AZZ74033
LinkDB
All DBs
Position
547868..549694
Genome browser
AA seq
608 aa
AA seq
DB search
MSSPEPKAQSTLAIYFRLLAYVRPYAGLFLLSIVGFLIFASTQPMLAYILKYFVDGLANP
EASLFPGNPYLGKLQLLETVPLMIVFIALWQGVGSYLGNFFLARVSLGLVHDLRVVLFNK
LLELPNRFFDKNNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFCTLLWMNWKL
TLVMVAILPLIGLMVNSTSKKFRKQSKKIQVSMGNVTHVASETIHGYRVVRSFGGEQYEK
DRFRDASQSNTDKQLTMTKTGAVYTPMLQLVTYSAMAVVMFLVLYLRGDASPGDLVAYIT
MAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEPAEVDQGTVEQDRLEGRLEVRNLSF
HYPDTDKAVLNDISFVVEPGQMVALVGRSGSGKSTLASLIPRFYQHDHAQGQILLDGVQV
QDFTLRSLRRQIALVTQQVTLFNDTVTNNIAYGDLAGAPFDEVKRAATEAYADEFIIKMP
QGYETMVGENGVLLSGGQRQRIAIARALLKDAPLLILDEATSALDTESERHIQAALDHVV
QNRTTLVIAHRLSTIEKADLILVMDEGRIVERGSHTQLLEQNGYYARLHAKEFEEGDEPQ
PAHVTNVC
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcctgaaccgaaagcccagtccacgctggcgatctatttccgccttttggct
tacgtgcggccttatgccggccttttccttctcagcatcgtcgggtttctgatcttcgca
tcgactcaaccgatgctcgcttacatcctcaagtactttgtcgacggtctggccaatcct
gaagccagtctgttcccgggcaatccttatctgggcaagctgcagttgctcgaaaccgtg
ccactgatgatcgttttcattgcactgtggcagggtgtgggttcgtatctgggcaacttc
ttcctggcgcgggtttcgctggggctggtgcatgacctgcgggtggtcctgttcaacaaa
ttgctcgagttgcccaatcgcttcttcgacaagaacaattccggccacctgatttcccgg
atcactttcaacgtgaccatggtcaccggcgcggcaacggatgccatcaaagtcgtcatc
cgtgaaggcatgaccgtgattttcctgttctgcacgctgttgtggatgaactggaagctc
accctggtgatggtcgcgatcctgccgttgatcggcttgatggtgaacagcaccagcaag
aaattccgcaagcagagcaagaagatccaggtctcgatgggcaacgtcacgcacgtcgcg
tccgagaccattcatggctaccgggttgtgcgcagcttcggcggcgagcagtacgaaaag
gatcgctttcgcgatgccagtcagagcaacaccgacaagcagttgacgatgaccaagacc
ggcgcggtttacacgccgatgctgcaactggtgacgtacagcgccatggccgtggtcatg
ttcctcgtgctgtaccttcgcggcgatgcttcgccgggcgatctggtggcctacatcacc
atggctggcctgctgcccaagccgatccgtcaattgtcggaagtcagttcgacgattcag
aaaggcgtggccggtgccgaaagcattttcgagcaactggacgagccggcggaagtggat
cagggcacggtcgagcaggatcgtctcgaaggccgtctggaagtgcgtaacctcagcttc
cactatcccgacaccgacaaagcggtactcaacgacatcagcttcgtcgtcgaaccgggg
cagatggtcgctctggtggggcgctcgggcagtggcaagtcgaccctcgccagcctgatt
ccacgcttttatcaacatgatcatgcgcagggccagatcctgcttgatggcgtgcaggtg
caggatttcaccctgcgcagcctgcgtcggcagatagctctggtgacccagcaggtcacg
ctgttcaacgatacggtgaccaacaacatcgcttacggcgatctggccggcgcaccgttc
gatgaggtcaagcgcgcggccaccgaagcctatgccgatgagttcatcatcaagatgccg
cagggttacgaaaccatggtcggcgaaaacggcgtactgctgtccggcggccagcgtcaa
cgcatcgccattgcccgggccctgctcaaggatgcgccgctgctgattctcgacgaagcc
acctccgcgctcgataccgagtcggagcggcacattcaggctgcgctggatcatgtggtg
cagaaccgcacgacactggtgatcgctcaccgtttgagcaccattgaaaaagccgacctg
attctggtcatggacgagggccgcatcgttgagcgtggctctcacacgcaattgctcgag
caaaacggctattacgcgcgtctgcatgccaaagagttcgaagagggtgacgagccacaa
ccggcacacgtgaccaacgtatgctga
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