Pseudomonas sp. RU47: CCX46_03955
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Entry
CCX46_03955 CDS
T11150
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psru Pseudomonas sp. RU47
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psru03016
]
CCX46_03955
Enzymes [BR:
psru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCX46_03955
Transfer RNA biogenesis [BR:
psru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCX46_03955
Prokaryotic type
CCX46_03955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
BAT
Motif
Other DBs
NCBI-ProteinID:
AZZ74319
LinkDB
All DBs
Position
922091..923008
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKAYETLAQLGKTTTTADAEGEVLQERPVTVGRADIEAALPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLQDWPLLHFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccg
ttgggattcacgtccaacgccgcgttgcagaaggttcgctggttgctcaacgccgagaag
gccggtcacaccggcagcctcgaccctctggccacgggcgtcttgccgttgtgctttggc
gaagcgaccaagttctcgcagtacctgctcgattccgacaaggcttatgaaaccctcgcg
caactgggtaagaccaccaccacggccgatgccgaaggtgaggttttgcaggagcgcccg
gtgaccgttggtcgcgccgatatcgaagcggcattgccgaaatttcgtgggcaaatcagt
cagataccgccgatgtactcggcgctcaagcgtgatggccagccgctctacaagttggct
cgtgcaggcgaagtagtggagcgtgaaccgcgttctgttactattgcgcgcttggaatta
ctggccttcgaaggcgatactgcacgacttgcggtggattgcagcaaaggcacctatatt
cgcaccctcgtggaggatatcggtgagcaactcggttgtggtgcgtacgtcgcggaattg
cgccgtacccaggccgggcctttcaccctggcgcagacggtgaccctcgaagagcttgaa
gcggtacatgccgagggcggcaacgaagcggtggatcgcttcctgatgccatcggacagc
ggcctgcaggattggccgttgctgcacttctccgaagcgagtgcgttctactggctcaac
ggccagccggtgcgtgccccggatgctccgaagttcggcatggtgcgggtacaggatcac
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccacgtcga
ctgattcggtcggaatga
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