Pseudomonas sp. RU47: CCX46_03965
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Entry
CCX46_03965 CDS
T11150
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCX46_03965 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psru03019
]
CCX46_03965 (pnp)
03016 Transfer RNA biogenesis [BR:
psru03016
]
CCX46_03965 (pnp)
Enzymes [BR:
psru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CCX46_03965 (pnp)
Messenger RNA biogenesis [BR:
psru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCX46_03965 (pnp)
Transfer RNA biogenesis [BR:
psru03016
]
Prokaryotic type
tRNA degradation factors
CCX46_03965 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AZZ74321
LinkDB
All DBs
Position
923614..925719
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPAPEA
TELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSSSEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVSAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcaatcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgtg
ttggtgactgtagtcggtgcaaaacaagctgatccaggcaagggcttcttccctctgtcg
gttcactaccaggaaaagacctacgctgccggtaagatccctggcggtttcttcaagcgt
gaaggccgtccttccgaaaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttccctgaaggtttcatgaacgaagtgcaggttgtctgcaccgttgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tcgggtatcccgttcgacggcccgatcggcgccgctcgcgttgccttccacgaaagcacc
ggctacctgctgaacccgacttacgagcagcaagcggcttcgagcctggacatggtcgtt
gccggtacttccgacgccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtactgtttgctcatgacgaattccaggttgtgatcaacgccgtt
aaagaactggccgctgaagctgccaagccaacctggacctgggctcctgcgccagaagcc
accgaactgctgggcgctatccgtgccgagttcggcgaagcgatctcccaggcttacacc
atcaccgtcaaggccgaccgttatgcgcgtctgggcgagctgaaggatcaagtcgttgcc
aagctgtccggtgaagaaggtcagccttcgtccagcgaagtcaaagccgctttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgacggtcgc
gacaccaaaaccgtacgtccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tcggcgctgttcacccgtggtgaaacccaggcgctggtcgttgcaacactgggcaccgcc
cgtgacgcacaactgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggtgctggtcgtcgt
gaaatcggtcacggccgtctggcccgtcgttcggtttcggccatgctgccagccgctgac
gtgttcccgtacaccatccgtgtggtttcggaaatcaccgaatccaacggttcgagctcg
atggcttccgtttgcggcgcttccctggccctgatggacgctggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggtctggtcaaggaaggcgagaagttcgcagttctgacc
gacatcctcggtgacgaagaccacctgggcgacatggacttcaaagtagccggtaccgcc
aaaggcgttactgcgctgcagatggacatcaagatcaaaggcatcaccgaagaaatcatg
gagatcgctctgggccaagccctggaagcgcgcctgaacatcctcggtcagatgaaccag
atcatcggccagtcgcgtaccgaactgtcggccaacgctccgaccatgatcgcgatgaaa
atcgacaccgacaagatccgtgatgttatcggtaaaggtggcgcgaccatccgtgcgatc
tgcgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggaagctgctgaagctgcacgtcagcgcgttctgggtatcaccgctgaagcc
gagatcggcaagatctatgtgggtaaagttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccgggcaaggacggtctggtgcacatctcgatgctgagcgacgctcgcgta
gagaaagtgaccgacatcctgaaagaaggccaggaagttgaagtactggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaagacgtggctgctgccaaggcttcgggc
gtttaa
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